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contig_metadata

8 rows where bioproject = "PRJNA577580", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 8 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 8 ✖

bioproject 1

  • PRJNA577580 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14592915 14592915 PRJNA577580_P_NODE_4792_length_409_cov_1.812500_g4714_i0 PRJNA577580 4792 409 1.8125 7.413125 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 283 1.28e-71   NTclustered gi|1850842921|gb|CP053447.1| 2026749 g4714 i0 79.75 72.3814180929095 400 74 97 7 12 407 430054 429658 Ignavibacteriae bacterium isolate IGN3 chromosome blastn 29604 283 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
27743320 27743320 PRJNA577580_P_NODE_1484_length_744_cov_3.453055_g1411_i0 PRJNA577580 1484 744 3.453055 25.6907292 Melioribacteraceae bacterium 2614255 Bacteria Bacteria 76.6 7.34e-12   NR KAB2846403.1 2614255 g1411 i0 34.7 0.709677419354839 176 100 69.4 7 62 577 453 617 KAB2846403.1 MAG: choice-of-anchor A family protein, partial [Melioribacteraceae bacterium] diamond 528 76.6 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Melioribacteraceae   Melioribacteraceae bacterium
27945996 27945996 PRJNA577580_P_NODE_10825_length_279_cov_2.582524_g10747_i0 PRJNA577580 10825 279 2.582524 7.20524196 Pseudomonadati 3379134 Bacteria Bacteria 160 8.049999999999999e-47   NR MBZ0204643.1 2053306 g10747 i0 94.1 2.74193548387097 85 5 91.4 0 23 277 47 131 MBZ0204643.1 LysM peptidoglycan-binding domain-containing protein [Ignavibacteria bacterium] diamond 765 161 0.993788819875776 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
29132435 29132435 PRJNA577580_P_NODE_1009_length_879_cov_3.617866_g945_i0 PRJNA577580 1009 879 3.617866 31.80104214 Ignavibacteria bacterium 2053306 Bacteria Bacteria 170 1.7599999999999999e-43   NR PLX33511.1 2053306 g945 i0 39.1 2.02730375426621 297 168 98.3 8 876 13 1306 1598 PLX33511.1 MAG: hypothetical protein C0600_00325 [Ignavibacteria bacterium] diamond 1782 170 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
29731992 29731992 PRJNA577580_P_NODE_14850_length_248_cov_0.891429_g14772_i0 PRJNA577580 14850 248 0.891429 2.21074392 Melioribacteraceae bacterium 2614255 Bacteria Bacteria 64.3 5.78e-10   NR MCF6268436.1 2614255 g14772 i0 44.7 3.67741935483871 76 38 90.7 2 239 15 176 248 MCF6268436.1 MerR family transcriptional regulator [Melioribacteraceae bacterium] diamond 912 64.3 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Melioribacteraceae   Melioribacteraceae bacterium
30521966 30521966 PRJNA577580_P_NODE_14793_length_248_cov_0.891429_g14715_i0 PRJNA577580 14793 248 0.891429 2.21074392 Ignavibacteria bacterium 2053306 Bacteria Bacteria 102 2.51e-23   NR MBD1210498.1 2053306 g14715 i0 88.1 1.01612903225806 84 4 99.2 2 246 1 126 205 MBD1210498.1 leucine-rich repeat domain-containing protein [Ignavibacteria bacterium] diamond 252 102 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
31343687 31343687 PRJNA577580_P_NODE_7756_length_324_cov_1.422311_g7678_i0 PRJNA577580 7756 324 1.422311 4.60828764 Ignavibacterium sp. 2651167 Bacteria Bacteria 54.3 6.43e-6   NR WP_348344159.1 2651167 g7678 i0 39.1 0.638888888888889 69 40 62 2 115 315 19 87 WP_348344159.1 hypothetical protein [Ignavibacterium sp.] diamond 207 54.3 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae Ignavibacterium Ignavibacterium sp.
31357223 31357223 PRJNA577580_P_NODE_4916_length_404_cov_2.287009_g4838_i0 PRJNA577580 4916 404 2.287009 9.23951636 Pseudomonadati 3379134 Bacteria Bacteria 99.4 2.91e-21   NR OGU71852.1 1798438 g4838 i0 42.9 5.45049504950495 105 60 78 0 24 338 421 525 OGU71852.1 MAG: phosphoglycerate dehydrogenase [Ignavibacteria bacterium RIFCSPLOWO2_12_FULL_56_21] diamond 2202 99.4 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium RIFCSPLOWO2_12_FULL_56_21

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;