RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA577580", tax_clade = "FCB group" and tax_phylum = "Candidatus Kapaibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA577580 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14592836 14592836 PRJNA577580_P_NODE_10452_length_284_cov_1.445498_g10374_i0 PRJNA577580 10452 284 1.445498 4.10521432 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 267 8.599999999999999e-67   NTclustered gi|1869359902|gb|CP058732.1| 2447898 g10374 i0 86.831 92.6619718309859 243 26 85 5 13 253 421956 421718 MAG: Candidatus Kapaibacterium sp. isolate Ch6 chromosome, complete genome blastn 26316 267 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
29605565 29605565 PRJNA577580_P_NODE_130_length_1765_cov_30.195035_g112_i0 PRJNA577580 130 1765 30.195035 532.94236775 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 90.5 1.21e-14   NR MBL7999252.1 2447898 g112 i0 28.1 0.435127478753541 256 149 43.2 11 94 855 1262 1484 MBL7999252.1 choice-of-anchor D domain-containing protein [Candidatus Kapaibacterium sp.] diamond 768 90.5 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
29795199 29795199 PRJNA577580_P_NODE_8511_length_311_cov_1.310924_g8433_i0 PRJNA577580 8511 311 1.310924 4.07697364 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 55.8 2.85e-7   NR MBL7991870.1 2447898 g8433 i0 36 0.829581993569132 86 53 83 1 11 268 8 91 MBL7991870.1 SgcJ/EcaC family oxidoreductase [Candidatus Kapaibacterium sp.] diamond 258 55.8 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;