RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA577580", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA577580 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29290113 29290113 PRJNA577580_P_NODE_14049_length_251_cov_0.876404_g13971_i0 PRJNA577580 14049 251 0.876404 2.19977404 Minisyncoccota bacterium 2053589 Bacteria Bacteria 49.3 1.95e-4   NR HEY1041783.1 2053589 g13971 i0 35.5 0.741035856573705 62 40 74.1 0 187 2 218 279 HEY1041783.1 MFS transporter [Candidatus Paceibacterota bacterium] diamond 186 49.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30111220 30111220 PRJNA577580_P_NODE_12832_length_259_cov_1.569892_g12754_i0 PRJNA577580 12832 259 1.569892 4.06602028 Minisyncoccota bacterium 2053589 Bacteria Bacteria 58.9 1.03e-8   NR MBP9717216.1 2053589 g12754 i0 43.5 1.96911196911197 85 47 98.5 1 3 257 32 115 MBP9717216.1 tryptophan-rich sensory protein [Candidatus Paceibacterota bacterium] diamond 510 58.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31691527 31691527 PRJNA577580_P_NODE_9757_length_293_cov_1.290909_g9679_i0 PRJNA577580 9757 293 1.290909 3.78236337 Minisyncoccota bacterium 2053589 Bacteria Bacteria 72.4 2.49e-12   NR MFA5933897.1 2053589 g9679 i0 45.5 0.78839590443686 77 42 78.8 0 56 286 1 77 MFA5933897.1 HTTM domain-containing protein [Candidatus Paceibacterota bacterium] diamond 231 72.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;