RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA577580", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Aminicenantota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA577580 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30724997 30724997 PRJNA577580_P_NODE_314_length_1357_cov_12.511682_g282_i0 PRJNA577580 314 1357 12.511682 169.78352474 Bacteria 2 Bacteria Bacteria 145 1.7099999999999996e-34   NR UCH98084.1 2052149 g282 i0 33 1.42593957258659 321 157 62.1 15 90 932 149 451 UCH98084.1 MAG: hypothetical protein JSV88_14860, partial [Candidatus Aminicenantes bacterium] diamond 1935 146 0.993150684931507 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
31090712 31090712 PRJNA577580_P_NODE_3335_length_493_cov_2.576190_g3257_i0 PRJNA577580 3335 493 2.57619 12.7006167 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 55.5 1.66e-6   NR MCK4336496.1 2052149 g3257 i0 48.1 2.38539553752535 52 27 31.6 0 414 259 65 116 MCK4336496.1 50S ribosomal protein L20 [Candidatus Aminicenantes bacterium] diamond 1176 55.5 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;