RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA577226" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA577226 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4965348 4965348 PRJNA577226_S_NODE_25864_length_246_cov_9.119617_g24925_i0 PRJNA577226 25864 246 9.119617 22.43425782 Stylommatophora 6527 Mollusca Mollusca 455 1.4500000000000002e-123   NTclustered gi|45360329|gb|AY546382.1| 42349 g24925 i0 100 152.906504065041 246 0 100 0 1 246 118 363 Albinaria caerulea 18S ribosomal RNA gene, partial sequence blastn 37615 455 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Clausiliidae Albinaria Albinaria caerulea
7515187 7515187 PRJNA577226_S_NODE_36326_length_206_cov_3.715976_g35387_i0 PRJNA577226 36326 206 3.715976 7.65491056 Cochlicopa 82565 Mollusca Mollusca 375 9.41e-100   NTclustered gi|13794040|gb|AY014020.1| 82566 g35387 i0 99.515 100.033980582524 206 1 100 0 1 206 865 660 Cochlicopa lubricella 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 20607 375 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Cochlicopidae Cochlicopa Cochlicopa lubricella
8214444 8214444 PRJNA577226_S_NODE_19427_length_288_cov_5.270916_g18488_i0 PRJNA577226 19427 288 5.270916 15.18023808 Apoecus ramelauensis 1918943 Mollusca Mollusca 466 8.03e-127   NTclustered gi|1108658002|gb|KX015964.1| 1918943 g18488 i0 96.14 177.559027777778 285 11 99 0 4 288 3736 3452 Apoecus ramelauensis voucher AM C.488753 28S ribosomal RNA gene, partial sequence blastn 51137 466 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Apoecus Apoecus ramelauensis
13315529 13315529 PRJNA577226_S_NODE_25871_length_246_cov_3.454545_g24932_i0 PRJNA577226 25871 246 3.454545 8.4981807 Cochlicopa lubrica 82567 Mollusca Mollusca 448 2.4299999999999995e-121   NTclustered gi|13794039|gb|AY014019.1| 82567 g24932 i0 99.593 100.182926829268 246 0 100 1 1 246 1147 1391 Cochlicopa lubrica 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 24645 448 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Cochlicopidae Cochlicopa Cochlicopa lubrica
13891345 13891345 PRJNA577226_S_NODE_32271_length_219_cov_4.489011_g31332_i0 PRJNA577226 32271 219 4.489011 9.83093409 Stylommatophora 6527 Mollusca Mollusca 399 6.009999999999999e-107   NTclustered gi|1700712068|gb|MN022659.1| 69431 g31332 i0 99.543 100 219 1 100 0 1 219 3200 3418 Albinaria xanthostoma 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 21900 399 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Clausiliidae Albinaria Albinaria xanthostoma
19688893 19688893 PRJNA577226_S_NODE_61236_length_161_cov_0.943548_g60297_i0 PRJNA577226 61236 161 0.943548 1.51911228 Haliotis asinina 109174 Mollusca Mollusca 147 5.959999999999999e-31   NTclustered gi|2793421131|ref|XM_067823665.1| 109174 g60297 i0 83.125 21.2422360248447 160 27 99 0 2 161 2965 3124 PREDICTED: Haliotis asinina uncharacterized protein (LOC137292124), mRNA blastn 3420 147 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis asinina
29290063 29290063 PRJNA577226_S_NODE_29889_length_228_cov_3.633508_g28950_i0 PRJNA577226 29889 228 3.633508 8.28439824 Dreissena polymorpha 45954 Mollusca Mollusca 63.9 1.04e-9   NR KAH3698300.1 45954 g28950 i0 60.6 0.868421052631579 66 21 86.8 1 25 222 378 438 KAH3698300.1 hypothetical protein DPMN_085819, partial [Dreissena polymorpha] diamond 198 63.9 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Dreissenidae Dreissena Dreissena polymorpha

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;