RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA577226" and tax_phylum = "Candidatus Sumerlaeota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Sumerlaeota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA577226 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
561928 561928 PRJNA577226_S_NODE_38901_length_199_cov_2.530864_g37962_i0 PRJNA577226 38901 199 2.530864 5.03641936 Candidatus Sumerlaea chitinivorans 2250252 Bacteria Bacteria 211 2.69e-50   NTclustered gi|1419285073|gb|CP030759.1| 2250252 g37962 i0 86.667 248.321608040201 195 20 96 6 1 192 163311 163120 Candidatus Sumerlaea chitinivorans isolate BY40 chromosome, complete genome blastn 49416 211 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae Candidatus Sumerlaea Candidatus Sumerlaea chitinivorans
24788019 24788019 PRJNA577226_S_NODE_38840_length_199_cov_28.154321_g37901_i0 PRJNA577226 38840 199 28.154321 56.02709879 Candidatus Sumerlaea chitinivorans 2250252 Bacteria Bacteria 147 7.699999999999999e-31   NTclustered gi|1419285073|gb|CP030759.1| 2250252 g37901 i0 81.183 111.763819095477 186 32 93 3 9 194 163320 163138 Candidatus Sumerlaea chitinivorans isolate BY40 chromosome, complete genome blastn 22241 147 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae Candidatus Sumerlaea Candidatus Sumerlaea chitinivorans
30648069 30648069 PRJNA577226_S_NODE_26133_length_245_cov_1.918269_g25194_i0 PRJNA577226 26133 245 1.918269 4.69975905 Candidatus Sumerlaeota bacterium 2107588 Bacteria Bacteria 50.4 4.45e-5   NR HMZ52829.1 2107588 g25194 i0 49.1 1.29795918367347 53 26 64.9 1 43 201 29 80 HMZ52829.1 metallophosphoesterase [Candidatus Sumerlaeota bacterium] diamond 318 50.4 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium
31659712 31659712 PRJNA577226_S_NODE_54217_length_170_cov_1.233083_g53278_i0 PRJNA577226 54217 170 1.233083 2.0962411 Candidatus Sumerlaeia bacterium 2715255 Bacteria Bacteria 48.1 1.71e-4   NR MDX2175098.1 2715255 g53278 i0 50 1.71176470588235 54 27 95.3 0 6 167 323 376 MDX2175098.1 ATP-binding protein [Candidatus Sumerlaeia bacterium] diamond 291 48.1 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia       Candidatus Sumerlaeia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;