contig_metadata
11 rows where bioproject = "PRJNA577226", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4389365 | 4389365 | PRJNA577226_S_NODE_39024_length_199_cov_1.790123_g38085_i0 | PRJNA577226 | 39024 | 199 | 1.790123 | 3.56234477 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 329 | 7.12e-86 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g38085 | i0 | 96.482 | 35.8894472361809 | 199 | 7 | 100 | 0 | 1 | 199 | 512473 | 512275 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 7142 | 329 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 4965456 | 4965456 | PRJNA577226_S_NODE_35084_length_210_cov_2.213873_g34145_i0 | PRJNA577226 | 35084 | 210 | 2.213873 | 4.6491333 | Bdellovibrio | 958 | Bacteria | Bacteria | 215 | 2.22e-51 | NTclustered | gi|2800924434|gb|CP168967.1| | 959 | g34145 | i0 | 88.701 | 22.2095238095238 | 177 | 18 | 84 | 2 | 35 | 210 | 784530 | 784355 | Bdellovibrio bacteriovorus strain Bd4 chromosome, complete genome | blastn | 4664 | 217 | 0.990783410138249 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 7515284 | 7515284 | PRJNA577226_S_NODE_44426_length_187_cov_1.186667_g43487_i0 | PRJNA577226 | 44426 | 187 | 1.186667 | 2.21906729 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 252 | 1.47e-62 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g43487 | i0 | 90.957 | 89.8128342245989 | 188 | 15 | 100 | 2 | 1 | 187 | 1543 | 1729 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 16795 | 252 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 9490772 | 9490772 | PRJNA577226_S_NODE_57288_length_165_cov_2.625000_g56349_i0 | PRJNA577226 | 57288 | 165 | 2.625 | 4.33125 | Bdellovibrio sp. qaytius | 1916293 | Bacteria | Bacteria | 244 | 2.12e-60 | NTclustered | gi|1552089877|gb|CP025734.1| | 1916293 | g56349 | i0 | 93.333 | 229.751515151515 | 165 | 11 | 100 | 0 | 1 | 165 | 665702 | 665538 | Bdellovibrio sp. qaytius chromosome, complete genome | blastn | 37909 | 244 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. qaytius | ||
| 16439994 | 16439994 | PRJNA577226_S_NODE_35113_length_210_cov_1.976879_g34174_i0 | PRJNA577226 | 35113 | 210 | 1.976879 | 4.1514459 | Bacteriovorax | 146784 | Bacteria | Bacteria | 235 | 1.6999999999999998e-57 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g34174 | i0 | 86.854 | 155.047619047619 | 213 | 24 | 100 | 3 | 1 | 210 | 1660596 | 1660385 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 32560 | 235 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 16440238 | 16440238 | PRJNA577226_S_NODE_54613_length_169_cov_1.803030_g53674_i0 | PRJNA577226 | 54613 | 169 | 1.80303 | 3.0471207 | Bacteriovorax | 146784 | Bacteria | Bacteria | 291 | 2.75e-74 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g53674 | i0 | 97.633 | 22.491124260355 | 169 | 4 | 100 | 0 | 1 | 169 | 1661759 | 1661591 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 3801 | 291 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 18988815 | 18988815 | PRJNA577226_S_NODE_47435_length_181_cov_1.493056_g46496_i0 | PRJNA577226 | 47435 | 181 | 1.493056 | 2.70243136 | Bacteriovorax | 146784 | Bacteria | Bacteria | 313 | 6.39e-81 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g46496 | i0 | 97.802 | 9.24309392265193 | 182 | 3 | 100 | 1 | 1 | 181 | 1661746 | 1661927 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 1673 | 313 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 18988961 | 18988961 | PRJNA577226_S_NODE_59415_length_163_cov_1.230159_g58476_i0 | PRJNA577226 | 59415 | 163 | 1.230159 | 2.00515917 | Bacteriovorax | 146784 | Bacteria | Bacteria | 285 | 1.23e-72 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g58476 | i0 | 98.16 | 532.398773006135 | 163 | 3 | 100 | 0 | 1 | 163 | 1661178 | 1661016 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 86781 | 285 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 24089497 | 24089497 | PRJNA577226_S_NODE_55759_length_168_cov_0.893130_g54820_i0 | PRJNA577226 | 55759 | 168 | 0.89313 | 1.5004584 | Bacteriovorax | 146784 | Bacteria | Bacteria | 300 | 4.56e-77 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g54820 | i0 | 98.81 | 192.928571428571 | 168 | 2 | 100 | 0 | 1 | 168 | 1662589 | 1662422 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 32412 | 300 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 25363751 | 25363751 | PRJNA577226_S_NODE_40740_length_195_cov_1.329114_g39801_i0 | PRJNA577226 | 40740 | 195 | 1.329114 | 2.5917723 | Peredibacter | 263370 | Bacteria | Bacteria | 327 | 2.5e-85 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g39801 | i0 | 96.923 | 386.882051282051 | 195 | 6 | 100 | 0 | 1 | 195 | 511893 | 512087 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 75442 | 327 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 26921407 | 26921407 | PRJNA577226_S_NODE_14242_length_342_cov_4.163934_g13303_i0 | PRJNA577226 | 14242 | 342 | 4.163934 | 14.24065428 | Micavibrio aeruginosavorus | 349221 | Bacteria | Bacteria | 128 | 4.009999999999999e-32 | NR | PZQ45584.1 | 349221 | g13303 | i0 | 55.7 | 2.02631578947368 | 115 | 48 | 98.2 | 1 | 5 | 340 | 178 | 292 | PZQ45584.1 MAG: glutamate--tRNA ligase [Micavibrio aeruginosavorus] | diamond | 693 | 128 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio aeruginosavorus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;