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contig_metadata

12 rows where bioproject = "PRJNA577226" and tax_kingdom = "Fusobacteriati"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Fusobacteriati · 12 ✖

bioproject 1

  • PRJNA577226 · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1137190 1137190 PRJNA577226_S_NODE_2301_length_1185_cov_18.551394_g1203_i2 PRJNA577226 2301 1185 18.551394 219.8340189 Fusobacteriaceae 203492 Bacteria Bacteria 1884 0   NTclustered gi|2706496642|gb|CP084152.1| 76857 g1203 i2 95.443 492.79746835443 1185 49 100 4 1 1185 2461744 2460565 Fusobacterium polymorphum strain KCOM2594 chromosome, complete genome blastn 583965 1893 0.995245641838352 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium polymorphum
5665149 5665149 PRJNA577226_S_NODE_24565_length_253_cov_5.944444_g23626_i0 PRJNA577226 24565 253 5.944444 15.03944332 Leptotrichia hofstadii 157688 Bacteria Bacteria 366 7.22e-97   NTclustered gi|1708566027|dbj|AP019823.1| 157688 g23626 i0 92.885 143.00395256917 253 17 100 1 1 253 577294 577545 Leptotrichia hofstadii JCM16775 DNA, complete genome blastn 36180 366 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Leptotrichia hofstadii
8215313 8215313 PRJNA577226_S_NODE_50287_length_176_cov_1.474820_g49348_i0 PRJNA577226 50287 176 1.47482 2.5956832 Leptotrichia sp. oral taxon 212 712357 Bacteria Bacteria 259 8.15e-65   NTclustered gi|922689899|gb|CP012410.1| 712357 g49348 i0 93.182 5 176 12 100 0 1 176 51845 52020 Leptotrichia sp. oral taxon 212 strain W10393, complete genome blastn 880 259 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Leptotrichia sp. oral taxon 212
10766792 10766792 PRJNA577226_S_NODE_6269_length_548_cov_14.463796_g5345_i0 PRJNA577226 6269 548 14.463796 79.26160208 Cetobacterium somerae 188913 Bacteria Bacteria 846 0   NTclustered gi|2201062197|gb|CP092519.1| 188913 g5345 i0 94.698 507.54197080292 547 26 99 3 1 547 49409 48866 Cetobacterium somerae strain CS2105-BJ chromosome, complete genome blastn 278133 846 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium somerae
12616110 12616110 PRJNA577226_S_NODE_16150_length_319_cov_108.755319_g15211_i0 PRJNA577226 16150 319 108.755319 346.92946761 Leptotrichia 32067 Bacteria Bacteria 507 5.31e-139   NTclustered gi|470484715|ref|NR_076664.1| 40542 g15211 i0 95.298 500.862068965517 319 15 100 0 1 319 2271 1953 Leptotrichia buccalis strain C-1013-b 23S ribosomal RNA gene, complete sequence blastn 159775 507 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Leptotrichia buccalis
15165755 15165755 PRJNA577226_S_NODE_6292_length_547_cov_17.368627_g5367_i0 PRJNA577226 6292 547 17.368627 95.00638969 Fusobacterium 848 Bacteria Bacteria 1000 0   NTclustered gi|1370537877|gb|CP028108.1| 860 g5367 i0 99.634 483.040219378428 547 2 100 0 1 547 461562 462108 Fusobacterium periodonticum strain 2_1_31 chromosome, complete genome blastn 264223 1005 0.995024875621891 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium periodonticum
15165756 15165756 PRJNA577226_S_NODE_63072_length_158_cov_3.958678_g62133_i0 PRJNA577226 63072 158 3.958678 6.25471124 Leptotrichia 32067 Bacteria Bacteria 241 2.6e-59   NTclustered gi|1227268105|gb|CP016753.1| 712368 g62133 i0 94.805 68.3037974683544 154 8 97 0 5 158 594012 594165 Leptotrichia sp. oral taxon 498, complete genome blastn 10792 241 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Leptotrichia sp. oral taxon 498
16439846 16439846 PRJNA577226_S_NODE_2313_length_1177_cov_13.361404_g1203_i3 PRJNA577226 2313 1177 13.361404 157.26372508 Cetobacterium 180162 Bacteria Bacteria 1753 0   NTclustered gi|2865366169|gb|CP122292.1| 188913 g1203 i3 93.633 518.932030586236 1178 67 99 8 6 1177 1578199 1577024 Cetobacterium somerae strain MSU41 chromosome, complete genome blastn 610783 1753 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium somerae
17715003 17715003 PRJNA577226_S_NODE_13134_length_357_cov_117.271875_g12195_i0 PRJNA577226 13134 357 117.271875 418.66059375 Fusobacterium 848 Bacteria Bacteria 654 0   NTclustered gi|2573686249|gb|CP133474.1| 851 g12195 i0 99.72 481.532212885154 357 1 100 0 1 357 321911 322267 Fusobacterium nucleatum strain LMG 13131 chromosome, complete genome blastn 171907 654 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium nucleatum
27711903 27711903 PRJNA577226_S_NODE_9984_length_417_cov_2.323684_g9048_i0 PRJNA577226 9984 417 2.323684 9.68976228 Fusobacterium necrophorum 859 Bacteria Bacteria 45.1 0.0376   NR WP_261791110.1 859 g9048 i0 26.5 0.841726618705036 117 69 71.9 3 323 24 369 485 WP_261791110.1 YadA-like family protein [Fusobacterium necrophorum] diamond 351 45.1 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium necrophorum
30346427 30346427 PRJNA577226_S_NODE_47732_length_180_cov_2.881119_g46793_i0 PRJNA577226 47732 180 2.881119 5.1860142 root 1 Root_unresolved Root_unresolved 65.9 1.11e-10   NR WP_021746646.1 157687 g46793 i0 49.2 2.83333333333333 59 29 96.7 1 176 3 668 726 WP_021746646.1 ribonucleotide reductase N-terminal alpha domain-containing protein [Leptotrichia wadei] diamond 510 65.9 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Leptotrichia wadei
30630105 30630105 PRJNA577226_S_NODE_58273_length_164_cov_1.748031_g57334_i0 PRJNA577226 58273 164 1.748031 2.86677084 FCB group 1783270 Bacteria Bacteria 54.7 7.75e-7   NR WP_021746646.1 157687 g57334 i0 47.2 2.8719512195122 53 28 97 0 5 163 612 664 WP_021746646.1 ribonucleotide reductase N-terminal alpha domain-containing protein [Leptotrichia wadei] diamond 471 55.1 0.992740471869329 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Leptotrichia wadei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;