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contig_metadata

8 rows where bioproject = "PRJNA577226", tax_kingdom = "Fungi" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 8 ✖

tax_kingdom 1

  • Fungi · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA577226 · 8 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1137603 1137603 PRJNA577226_S_NODE_58581_length_164_cov_1.228346_g57642_i0 PRJNA577226 58581 164 1.228346 2.01448744 Opisthokonta 33154 Fungi Fungi 143 7.9e-30   NTclustered gi|2724944551|ref|XM_064832534.1| 708070 g57642 i0 82.53 81.25 166 25 100 4 1 164 858 1021 Mucor velutinosus actin (ATC70_013370), partial mRNA blastn 13325 143 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor velutinosus
6939479 6939479 PRJNA577226_S_NODE_20026_length_283_cov_8.605691_g19087_i0 PRJNA577226 20026 283 8.605691 24.354105529999998 Mucor sp. 1715236 Fungi Fungi 523 4.5999999999999983e-144   NTclustered gi|1845966615|gb|MT523967.1| 1715236 g19087 i0 100 100.462897526502 283 0 100 0 1 283 795 513 Mucor sp. strain CBS 125018 small subunit ribosomal RNA gene, partial sequence blastn 28431 523 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor sp.
12616113 12616113 PRJNA577226_S_NODE_16430_length_316_cov_30.275986_g15491_i0 PRJNA577226 16430 316 30.275986 95.67211576 Fungi 4751 Fungi Fungi 518 2.4299999999999998e-142   NTclustered gi|658131632|emb|HF968958.1| 4874 g15491 i0 96.203 150.120253164557 316 12 100 0 1 316 2311 1996 Gigaspora margarita partial 28S rRNA gene, strain BEG34, isolate spore 4, clone BL2_6_26 blastn 47438 518 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita
12616192 12616192 PRJNA577226_S_NODE_22110_length_268_cov_7.870130_g21171_i0 PRJNA577226 22110 268 7.87013 21.0919484 Opisthokonta 33154 Fungi Fungi 442 1.2499999999999994e-119   NTclustered gi|168378|gb|M26190.1|MRARRHA 4841 g21171 i0 96.642 43.1007462686567 268 6 100 3 1 268 3344 3608 M.racemosus (Zygomycetes) 25S ribosomal RNA gene blastn 11551 442 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
15165228 15165228 PRJNA577226_S_NODE_16832_length_312_cov_13.905455_g15893_i0 PRJNA577226 16832 312 13.905455 43.3850196 Mucor 4830 Fungi Fungi 496 1.12e-135   NTclustered gi|2092094856|ref|NG_076789.1| 29922 g15893 i0 96.078 98.5769230769231 306 9 97 2 9 312 1 305 Mucor mucedo CBS 640.67 18S rRNA gene, partial sequence; from TYPE material blastn 30756 496 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor mucedo
22814722 22814722 PRJNA577226_S_NODE_51758_length_173_cov_8.360294_g50819_i0 PRJNA577226 51758 173 8.360294 14.46330862 Opisthokonta 33154 Fungi Fungi 320 3.61e-83   NTclustered gi|225134681|gb|FJ345353.1| 4841 g50819 i0 100 74.1098265895954 173 0 100 0 1 173 2135 1963 Mucor racemosus strain ATCC 42647 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 12821 320 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
23514735 23514735 PRJNA577226_S_NODE_5619_length_587_cov_7.869091_g4706_i0 PRJNA577226 5619 587 7.869091 46.19156417 Mucor piriformis 105697 Fungi Fungi 959 0   NTclustered gi|1473253570|gb|MH866514.1| 105697 g4706 i0 96.259 100.364565587734 588 17 100 5 1 587 891 308 Mucor piriformis culture CBS:225.29 strain CBS 225.29 large subunit ribosomal RNA gene, partial sequence blastn 58914 959 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor piriformis
24089159 24089159 PRJNA577226_S_NODE_24559_length_253_cov_11.231481_g23620_i0 PRJNA577226 24559 253 11.231481 28.41564693 Mucor 4830 Fungi Fungi 464 2.49e-126   NTclustered gi|914854|emb|X89434.1| 29922 g23620 i0 99.605 100 253 1 100 0 1 253 1113 861 M.mucedo DNA for 18S ribosomal RNA gene blastn 25300 468 0.991452991452991 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor mucedo

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;