RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA577226", tax_kingdom = "Bacillati" and tax_phylum = "Mycoplasmatota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA577226 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15864869 15864869 PRJNA577226_S_NODE_51233_length_174_cov_2.394161_g50294_i0 PRJNA577226 51233 174 2.394161 4.16584014 Spiroplasma endosymbiont of Heliconius timareta 1871747 Bacteria Bacteria 78.7 2.41e-10   NTclustered gi|1113016030|gb|KT283164.1| 1871747 g50294 i0 91.228 7.41954022988506 57 5 33 0 117 173 550 606 Spiroplasma endosymbiont of Heliconius timareta isolate 8521 23S ribosomal RNA gene, partial sequence blastn 1291 78.7 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Entomoplasmatales Spiroplasmataceae Spiroplasma Spiroplasma endosymbiont of Heliconius timareta
32527890 32527890 PRJNA577226_S_NODE_38559_length_200_cov_2.165644_g37620_i0 PRJNA577226 38559 200 2.165644 4.331288 Bacillati 1783272 Bacteria Bacteria 43.9 0.0081   NR MDR4969456.1 1898209 g37620 i0 37.5 1.71 56 35 84 0 33 200 58 113 MDR4969456.1 hypothetical protein [Acholeplasmataceae bacterium] diamond 342 43.9 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Acholeplasmatales Acholeplasmataceae   Acholeplasmataceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;