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contig_metadata

7 rows where bioproject = "PRJNA577226", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA577226 · 7 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6940478 6940478 PRJNA577226_S_NODE_55446_length_168_cov_1.480916_g54507_i0 PRJNA577226 55446 168 1.480916 2.48793888 Guttulinopsis rogosa 2231170 SAR_Eukaryotes SAR_Eukaryotes 311 2.11e-80   NTclustered gi|1402550485|gb|MH488771.1| 2231170 g54507 i0 100 79.2619047619048 168 0 100 0 1 168 1968 1801 Guttulinopsis rogosa isolate ATCC 50030 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 13316 311 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis rogosa
8215513 8215513 PRJNA577226_S_NODE_57807_length_165_cov_1.218750_g56868_i0 PRJNA577226 57807 165 1.21875 2.0109375 Cercozoa sp. CC-2009d 629762 SAR_Eukaryotes SAR_Eukaryotes 174 2.82e-39   NTclustered gi|290760487|gb|GQ144690.1| 629762 g56868 i0 85.976 95.2121212121212 164 21 99 2 2 165 1434 1273 Cercozoa sp. CC-2009d large subunit ribosomal RNA gene, partial sequence blastn 15710 174 1 Eukaryota Sar   Cercozoa         Cercozoa sp. CC-2009d
13315786 13315786 PRJNA577226_S_NODE_35471_length_209_cov_1.947674_g34532_i0 PRJNA577226 35471 209 1.947674 4.07063866 uncultured Cercozoa 175275 SAR_Eukaryotes SAR_Eukaryotes 351 1.61e-92   NTclustered gi|219524910|gb|EU709273.1| 175275 g34532 i0 97.115 99.5311004784689 208 6 99 0 2 209 730 937 Uncultured cercozoan isolate AH44p78p118t17 18S ribosomal RNA gene, partial sequence blastn 20802 351 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa
15864525 15864525 PRJNA577226_S_NODE_38253_length_201_cov_1.713415_g37314_i0 PRJNA577226 38253 201 1.713415 3.44396415 Guttulinopsis rogosa 2231170 SAR_Eukaryotes SAR_Eukaryotes 372 1.18e-98   NTclustered gi|1402550488|gb|MH488774.1| 2231170 g37314 i0 100 27.0199004975124 201 0 100 0 1 201 1516 1316 Guttulinopsis rogosa isolate FOLDEDA sequence blastn 5431 372 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis rogosa
18988939 18988939 PRJNA577226_S_NODE_57235_length_165_cov_4.078125_g56296_i0 PRJNA577226 57235 165 4.078125 6.72890625 Guttulinopsis 1144921 SAR_Eukaryotes SAR_Eukaryotes 300 4.46e-77   NTclustered gi|1402550487|gb|MH488773.1| 2231167 g56296 i0 99.398 48.5393939393939 166 0 100 1 1 165 1153 988 Guttulinopsis sp. isolate STA small subunit ribosomal RNA gene, partial sequence blastn 8009 302 0.993377483443709 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis sp.
20964277 20964277 PRJNA577226_S_NODE_45977_length_184_cov_1.183673_g45038_i0 PRJNA577226 45977 184 1.183673 2.17795832 Guttulinopsis rogosa 2231170 SAR_Eukaryotes SAR_Eukaryotes 340 2.99e-89   NTclustered gi|1402550486|gb|MH488772.1| 2231170 g45038 i0 100 14.9130434782609 184 0 100 0 1 184 589 406 Guttulinopsis rogosa isolate T1 small subunit ribosomal RNA gene, partial sequence blastn 2744 340 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis rogosa
23514945 23514945 PRJNA577226_S_NODE_64019_length_157_cov_2.916667_g63080_i0 PRJNA577226 64019 157 2.916667 4.57916719 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 250 4.28e-62   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g63080 i0 96.667 111.254777070064 150 5 96 0 4 153 3840 3691 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 17467 250 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;