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contig_metadata

24 rows where bioproject = "PRJNA577226" and tax_clade = "Sar"

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tax_phylum 3

analysis 2

tax_superkingdom 1

tax_clade 1

  • Sar · 24 ✖

bioproject 1

  • PRJNA577226 · 24 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1137646 1137646 PRJNA577226_S_NODE_62401_length_159_cov_1.868852_g61462_i0 PRJNA577226 62401 159 1.868852 2.97147468 Eimeriidae 5799 SAR_Eukaryotes SAR_Eukaryotes 226 7.329999999999998e-55   NTclustered gi|324022090|gb|GU593707.1| 5801 g61462 i0 94.558 92.0503144654088 147 7 92 1 1 146 1785 1639 Eimeria acervulina strain Miska2 28S ribosomal RNA gene, partial sequence blastn 14636 226 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
4388949 4388949 PRJNA577226_S_NODE_24224_length_255_cov_2.977064_g23285_i0 PRJNA577226 24224 255 2.977064 7.5915132 Hydrurus foetidus 2996 SAR_Eukaryotes SAR_Eukaryotes 355 1.58e-93   NTclustered gi|2550427459|gb|OR336050.1| 2996 g23285 i0 92.063 97.0235294117647 252 20 99 0 4 255 2047 1796 Hydrurus foetidus strain Fenhe 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 24741 355 1 Eukaryota Sar     Chrysophyceae Hydrurales Hydruraceae Hydrurus Hydrurus foetidus
4965761 4965761 PRJNA577226_S_NODE_60464_length_161_cov_3.798387_g59525_i0 PRJNA577226 60464 161 3.798387 6.11540307 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 270 3.389999999999999e-68   NTclustered gi|174168|gb|M87332.1|CMIRRNAA 2998 g59525 i0 96.894 98.6832298136646 161 5 100 0 1 161 1579 1419 Chromulina chionophila small subunit ribosomal RNA gene, partial sequence blastn 15888 270 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Chromulina Chromulina chionophila
6939308 6939308 PRJNA577226_S_NODE_14326_length_341_cov_7.125000_g13387_i0 PRJNA577226 14326 341 7.125 24.29625 Stramenopiles sp. MAST-4E-sp1 2805728 SAR_Eukaryotes SAR_Eukaryotes 230 1.3899999999999995e-55   NTclustered gi|1960721538|gb|MW521834.1| 2805728 g13387 i0 79.341 86.3343108504399 334 63 98 4 8 341 3528 3855 Stramenopiles sp. MAST-4E-sp1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 29440 230 1 Eukaryota Sar             Stramenopiles sp. MAST-4E-sp1
6940478 6940478 PRJNA577226_S_NODE_55446_length_168_cov_1.480916_g54507_i0 PRJNA577226 55446 168 1.480916 2.48793888 Guttulinopsis rogosa 2231170 SAR_Eukaryotes SAR_Eukaryotes 311 2.11e-80   NTclustered gi|1402550485|gb|MH488771.1| 2231170 g54507 i0 100 79.2619047619048 168 0 100 0 1 168 1968 1801 Guttulinopsis rogosa isolate ATCC 50030 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 13316 311 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis rogosa
6940716 6940716 PRJNA577226_S_NODE_6466_length_539_cov_3.392430_g5541_i0 PRJNA577226 6466 539 3.39243 18.2851977 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 874 0   NTclustered gi|820695469|tpe|LN714488.1| 572307 g5541 i0 95.918 67.1094619666048 539 22 100 0 1 539 116692 116154 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 36172 874 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
8215513 8215513 PRJNA577226_S_NODE_57807_length_165_cov_1.218750_g56868_i0 PRJNA577226 57807 165 1.21875 2.0109375 Cercozoa sp. CC-2009d 629762 SAR_Eukaryotes SAR_Eukaryotes 174 2.82e-39   NTclustered gi|290760487|gb|GQ144690.1| 629762 g56868 i0 85.976 95.2121212121212 164 21 99 2 2 165 1434 1273 Cercozoa sp. CC-2009d large subunit ribosomal RNA gene, partial sequence blastn 15710 174 1 Eukaryota Sar   Cercozoa         Cercozoa sp. CC-2009d
10765635 10765635 PRJNA577226_S_NODE_21089_length_276_cov_1.108787_g20150_i0 PRJNA577226 21089 276 1.108787 3.06025212 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 353 6.21e-93   NTclustered gi|820695469|tpe|LN714488.1| 572307 g20150 i0 91.44 7.25724637681159 257 22 100 0 1 257 117442 117698 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 2003 353 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
10766362 10766362 PRJNA577226_S_NODE_46189_length_183_cov_2.136986_g45250_i0 PRJNA577226 46189 183 2.136986 3.91068438 Chrysophyceae sp. 1955566 SAR_Eukaryotes SAR_Eukaryotes 259 8.56e-65   NTclustered gi|1209183015|gb|KX100757.1| 1955566 g45250 i0 92.896 100.491803278689 183 6 100 5 1 183 460 635 Chrysophyceae sp. strain FU34KK 28S ribosomal RNA gene, partial sequence blastn 18390 259 1 Eukaryota Sar     Chrysophyceae       Chrysophyceae sp.
12040621 12040621 PRJNA577226_S_NODE_25870_length_246_cov_3.555024_g24931_i0 PRJNA577226 25870 246 3.555024 8.74535904 Chrysophyceae sp. 1955566 SAR_Eukaryotes SAR_Eukaryotes 169 2.11e-37   NTclustered gi|1209183015|gb|KX100757.1| 1955566 g24931 i0 79.518 46.6463414634146 249 42 100 9 1 246 466 224 Chrysophyceae sp. strain FU34KK 28S ribosomal RNA gene, partial sequence blastn 11475 169 1 Eukaryota Sar     Chrysophyceae       Chrysophyceae sp.
13315786 13315786 PRJNA577226_S_NODE_35471_length_209_cov_1.947674_g34532_i0 PRJNA577226 35471 209 1.947674 4.07063866 uncultured Cercozoa 175275 SAR_Eukaryotes SAR_Eukaryotes 351 1.61e-92   NTclustered gi|219524910|gb|EU709273.1| 175275 g34532 i0 97.115 99.5311004784689 208 6 99 0 2 209 730 937 Uncultured cercozoan isolate AH44p78p118t17 18S ribosomal RNA gene, partial sequence blastn 20802 351 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa
13891369 13891369 PRJNA577226_S_NODE_34751_length_211_cov_2.339080_g33812_i0 PRJNA577226 34751 211 2.33908 4.9354588 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 209 1.04e-49   NTclustered gi|2285976|emb|Y07977.1| 2986 g33812 i0 85.116 102.14691943128 215 21 100 8 1 211 2379 2586 O.danica 28S rRNA gene and ITS2 DNA blastn 21553 211 0.990521327014218 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Ochromonas Ochromonas danica
13891749 13891749 PRJNA577226_S_NODE_67651_length_154_cov_1.273504_g66712_i0 PRJNA577226 67651 154 1.273504 1.96119616 Spumella 89043 SAR_Eukaryotes SAR_Eukaryotes 274 2.48e-69   NTclustered gi|2055919761|gb|MZ420319.1| 1841649 g66712 i0 98.701 79.8636363636364 154 2 100 0 1 154 1554 1401 Spumella bureschii strain Saenggeunje120118A5 large subunit ribosomal RNA gene, partial sequence blastn 12299 274 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Spumella Spumella bureschii
15864525 15864525 PRJNA577226_S_NODE_38253_length_201_cov_1.713415_g37314_i0 PRJNA577226 38253 201 1.713415 3.44396415 Guttulinopsis rogosa 2231170 SAR_Eukaryotes SAR_Eukaryotes 372 1.18e-98   NTclustered gi|1402550488|gb|MH488774.1| 2231170 g37314 i0 100 27.0199004975124 201 0 100 0 1 201 1516 1316 Guttulinopsis rogosa isolate FOLDEDA sequence blastn 5431 372 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis rogosa
18413087 18413087 PRJNA577226_S_NODE_13335_length_354_cov_3.567823_g12396_i0 PRJNA577226 13335 354 3.567823 12.63009342 Chrysophyceae sp. 1955566 SAR_Eukaryotes SAR_Eukaryotes 560 4.5e-155   NTclustered gi|1209182845|gb|KX100587.1| 1955566 g12396 i0 95.211 100.545197740113 355 15 100 2 1 354 461 814 Chrysophyceae sp. strain FU34KF 18S ribosomal RNA gene, partial sequence blastn 35593 560 1 Eukaryota Sar     Chrysophyceae       Chrysophyceae sp.
18988767 18988767 PRJNA577226_S_NODE_43095_length_189_cov_2.940789_g42156_i0 PRJNA577226 43095 189 2.940789 5.55809121 Synura 2991 SAR_Eukaryotes SAR_Eukaryotes 97.1 7.39e-16   NTclustered gi|859809386|gb|KM590657.1| 52555 g42156 i0 76.684 56.0529100529101 193 33 100 11 1 189 1856 2040 Synura petersenii strain Buje100307A 26S ribosomal RNA gene, partial sequence blastn 10594 97.1 1 Eukaryota Sar     Synurophyceae Synurales Mallomonadaceae Synura Synura petersenii
18988939 18988939 PRJNA577226_S_NODE_57235_length_165_cov_4.078125_g56296_i0 PRJNA577226 57235 165 4.078125 6.72890625 Guttulinopsis 1144921 SAR_Eukaryotes SAR_Eukaryotes 300 4.46e-77   NTclustered gi|1402550487|gb|MH488773.1| 2231167 g56296 i0 99.398 48.5393939393939 166 0 100 1 1 165 1153 988 Guttulinopsis sp. isolate STA small subunit ribosomal RNA gene, partial sequence blastn 8009 302 0.993377483443709 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis sp.
20964277 20964277 PRJNA577226_S_NODE_45977_length_184_cov_1.183673_g45038_i0 PRJNA577226 45977 184 1.183673 2.17795832 Guttulinopsis rogosa 2231170 SAR_Eukaryotes SAR_Eukaryotes 340 2.99e-89   NTclustered gi|1402550486|gb|MH488772.1| 2231170 g45038 i0 100 14.9130434782609 184 0 100 0 1 184 589 406 Guttulinopsis rogosa isolate T1 small subunit ribosomal RNA gene, partial sequence blastn 2744 340 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis rogosa
20964327 20964327 PRJNA577226_S_NODE_47697_length_180_cov_4.790210_g46758_i0 PRJNA577226 47697 180 4.79021 8.622378 Mallomonas asmundiae 64709 SAR_Eukaryotes SAR_Eukaryotes 250 5.04e-62   NTclustered gi|16326554|gb|AF409122.1| 64709 g46758 i0 91.758 5.31666666666667 182 11 100 4 1 180 3898 3719 Mallomonas asmundae internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 957 250 1 Eukaryota Sar     Synurophyceae Synurales Mallomonadaceae Mallomonas Mallomonas asmundiae
23514611 23514611 PRJNA577226_S_NODE_51599_length_174_cov_1.189781_g50660_i0 PRJNA577226 51599 174 1.189781 2.07021894 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 217 4.91e-52   NTclustered gi|820695469|tpe|LN714488.1| 572307 g50660 i0 89.08 2.00574712643678 174 19 100 0 1 174 80576 80749 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 349 217 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
23514945 23514945 PRJNA577226_S_NODE_64019_length_157_cov_2.916667_g63080_i0 PRJNA577226 64019 157 2.916667 4.57916719 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 250 4.28e-62   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g63080 i0 96.667 111.254777070064 150 5 96 0 4 153 3840 3691 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 17467 250 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
24788187 24788187 PRJNA577226_S_NODE_45560_length_184_cov_3.360544_g44621_i0 PRJNA577226 45560 184 3.360544 6.18340096 Spumella sociabilis 459038 SAR_Eukaryotes SAR_Eukaryotes 329 6.47e-86   NTclustered gi|161015698|gb|EF681932.1| 459038 g44621 i0 98.913 99.9130434782609 184 2 100 0 1 184 1063 880 Spumella sociabilis strain HFCC76 28S ribosomal RNA gene, partial sequence blastn 18384 329 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Spumella Spumella sociabilis
28342913 28342913 PRJNA577226_S_NODE_3986_length_737_cov_3.170000_g3126_i0 PRJNA577226 3986 737 3.17 23.3629 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 47.8 0.0321   NR XP_029220138.1 94643 g3126 i0 33.9 0.492537313432836 121 69 48.8 2 275 634 559 669 XP_029220138.1 ankyrin repeat-containing protein [Besnoitia besnoiti] diamond 363 47.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
32842598 32842598 PRJNA577226_S_NODE_7220_length_503_cov_3.098712_g6290_i0 PRJNA577226 7220 503 3.098712 15.58652136 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 137 4.92e-35   NR P25166.1 5949 g6290 i0 58.2 10.1153081510934 122 42 72.8 3 503 138 324 436 P25166.1 RecName: Full=Elongation factor 1-alpha; Short=EF-1-alpha [Stylonychia lemnae] diamond 5088 137 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;