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contig_metadata

9 rows where bioproject = "PRJNA577226" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 9 ✖

bioproject 1

  • PRJNA577226 · 9 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2412690 2412690 PRJNA577226_S_NODE_32102_length_220_cov_2.131148_g31163_i0 PRJNA577226 32102 220 2.131148 4.6885256 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 63.9 9e-6   NTclustered gi|2719226838|gb|PP695237.1| 51637 g31163 i0 100 15.7545454545455 34 0 15 0 110 143 3974 4007 Naegleria lovaniensis strain TS rDNA-containing extrachromosomal element genomic sequence blastn 3466 63.9 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
3113343 3113343 PRJNA577226_S_NODE_60903_length_161_cov_1.411290_g59964_i0 PRJNA577226 60903 161 1.41129 2.2721769 Allovahlkampfia sp. strain SO/1P 500012 Heterolobosea other_Eukaryota 291 2.6e-74   NTclustered gi|529154115|gb|EU266548.2| 500012 g59964 i0 99.379 21.9192546583851 161 0 100 1 1 161 255 414 Allovahlkampfia sp. strain SO/1P small subunit ribosomal RNA gene, complete sequence blastn 3529 291 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. strain SO/1P
4389298 4389298 PRJNA577226_S_NODE_36684_length_205_cov_2.654762_g35745_i0 PRJNA577226 36684 205 2.654762 5.4422621 uncultured marine diplonemid 547051 Euglenozoa other_Eukaryota 161 2.8499999999999995e-35   NTclustered gi|223047901|gb|FJ032685.1| 547051 g35745 i0 81.25 86.6 208 32 100 6 1 205 2573 2776 Uncultured marine diplonemid clone Ma131_1A46 28S ribosomal RNA gene, partial sequence blastn 17753 161 1 Eukaryota Discoba   Euglenozoa Diplonemea       uncultured marine diplonemid
13316244 13316244 PRJNA577226_S_NODE_50751_length_175_cov_1.739130_g49812_i0 PRJNA577226 50751 175 1.73913 3.0434775 Allovahlkampfia sp. S35YCH 2919519 Heterolobosea other_Eukaryota 324 2.83e-84   NTclustered gi|2199280130|dbj|LC683687.1| 2919519 g49812 i0 100 24.0971428571429 175 0 100 0 1 175 44 218 Allovahlkampfia sp. S35YCH gene for 18S ribosomal RNA, partial sequence blastn 4217 324 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. S35YCH
14591058 14591058 PRJNA577226_S_NODE_52672_length_172_cov_1.725926_g51733_i0 PRJNA577226 52672 172 1.725926 2.96859272 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 285 1.31e-72   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g51733 i0 97.59 84.2441860465116 166 4 97 0 1 166 3048 2883 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 14490 285 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
15864086 15864086 PRJNA577226_S_NODE_21293_length_274_cov_1.957806_g20354_i0 PRJNA577226 21293 274 1.957806 5.36438844 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 492 1.2499999999999996e-134   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g20354 i0 99.265 74.8394160583942 272 2 99 0 1 272 3179 3450 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 20506 492 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
18414257 18414257 PRJNA577226_S_NODE_55655_length_168_cov_1.190840_g54716_i0 PRJNA577226 55655 168 1.19084 2.0006112 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 222 1.02e-53   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g54716 i0 99.187 2.19642857142857 123 1 73 0 6 128 3648 3770 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 369 222 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
22238414 22238414 PRJNA577226_S_NODE_19558_length_287_cov_2.872000_g18619_i0 PRJNA577226 19558 287 2.872 8.24264 Allovahlkampfia sp. S35YCH 2919519 Heterolobosea other_Eukaryota 518 2.18e-142   NTclustered gi|2199280130|dbj|LC683687.1| 2919519 g18619 i0 99.303 87.5087108013937 287 1 100 1 1 287 1303 1018 Allovahlkampfia sp. S35YCH gene for 18S ribosomal RNA, partial sequence blastn 25115 518 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. S35YCH
23513902 23513902 PRJNA577226_S_NODE_26259_length_244_cov_2.961353_g25320_i0 PRJNA577226 26259 244 2.961353 7.22570132 Allovahlkampfia sp. strain SO/1P 500012 Heterolobosea other_Eukaryota 231 2.63e-56   NTclustered gi|529154115|gb|EU266548.2| 500012 g25320 i0 95.833 65.9959016393443 144 5 59 1 101 243 661 804 Allovahlkampfia sp. strain SO/1P small subunit ribosomal RNA gene, complete sequence blastn 16103 231 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. strain SO/1P

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;