RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA577226", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA577226 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8214681 8214681 PRJNA577226_S_NODE_27767_length_237_cov_3.310000_g26828_i0 PRJNA577226 27767 237 3.31 7.8447 Minisyncoccota bacterium 2053589 Bacteria Bacteria 100 7.49e-17   NTclustered gi|2556887672|gb|CP129474.1| 2053589 g26828 i0 89.744 3.87763713080169 78 8 33 0 150 227 274741 274664 MAG: Candidatus Paceibacterota bacterium isolate cMAG.22 chromosome, complete genome blastn 919 100 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31659698 31659698 PRJNA577226_S_NODE_23437_length_260_cov_1.748879_g22498_i0 PRJNA577226 23437 260 1.748879 4.5470854 Minisyncoccota bacterium 2053589 Bacteria Bacteria 53.5 5.9e-7   NR MFA5937323.1 2053589 g22498 i0 55.6 0.519230769230769 45 20 51.9 0 126 260 16 60 MFA5937323.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 135 53.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32482622 32482622 PRJNA577226_S_NODE_7879_length_480_cov_3.462754_g6947_i0 PRJNA577226 7879 480 3.462754 16.6212192 Minisyncoccota bacterium 2053589 Bacteria Bacteria 87.4 1.4e-18   NR MDI9407777.1 2053589 g6947 i0 61.1 0.45 72 27 45 1 420 205 41 111 MDI9407777.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 216 87.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;