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contig_metadata

34 rows where bioproject = "PRJNA576995" and tax_superkingdom = "Viruses"

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tax_kingdom 3

analysis 2

tax_superkingdom 1

  • Viruses · 34 ✖

bioproject 1

  • PRJNA576995 · 34 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
560707 560707 PRJNA576995_P_NODE_22561_length_320_cov_1.246964_g21969_i0 PRJNA576995 22561 320 1.246964 3.9902848 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 89.8 2.29e-13   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g21969 i0 90 0.35625 70 6 22 1 1 69 5 74 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 114 89.8 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1
560723 560723 PRJNA576995_P_NODE_23521_length_314_cov_1.278008_g22929_i0 PRJNA576995 23521 314 1.278008 4.01294512 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 132 3.67e-26   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g22929 i0 100 1.52547770700637 71 0 23 0 244 314 72 2 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 479 132 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1
560907 560907 PRJNA576995_P_NODE_36021_length_250_cov_0.870056_g35429_i0 PRJNA576995 36021 250 0.870056 2.17514 Hepacivirus hominis 3052230 Viruses Viruses 52.8 0.023   NTclustered gi|1783579944|gb|MN628595.1| 3052230 g35429 i0 100 0.112 28 0 11 0 223 250 28 1 Hepacivirus hominis strain SL4 polyprotein (POLY) gene, complete cds blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Flasuviricetes Amarillovirales Flaviviridae Hepacivirus Hepacivirus hominis
560957 560957 PRJNA576995_P_NODE_40101_length_245_cov_0.895349_g39509_i0 PRJNA576995 40101 245 0.895349 2.19360505 Caudoviricetes sp. 2832643 Viruses Viruses 448 2.41e-121   NTclustered gi|2058123527|tpg|BK033972.1| 2832643 g39509 i0 99.592 1.62040816326531 245 1 100 0 1 245 53426 53670 MAG TPA_asm: Caudoviricetes sp. isolate ct2Fx2, partial genome blastn 397 448 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
1835838 1835838 PRJNA576995_P_NODE_11902_length_442_cov_1.650407_g11310_i0 PRJNA576995 11902 442 1.650407 7.29479894 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 76.8 2.54e-9   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g11310 i0 100 0.714932126696833 41 0 9 0 402 442 63 23 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 316 76.8 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1
1836317 1836317 PRJNA576995_P_NODE_43522_length_241_cov_0.886905_g42930_i0 PRJNA576995 43522 241 0.886905 2.13744105 Monilinia fructicola binarnavirus 1 2964624 Viruses Viruses 82.4 2.77e-11   NTclustered gi|2273758213|gb|ON038387.1| 2964624 g42930 i0 88.235 1.39419087136929 68 8 28 0 1 68 2465 2398 Monilinia fructicola binarnavirus 1 RNA-dependent RNA polymerase gene, complete cds blastn 336 82.4 1 Viruses   Orthornavirae       Birnaviridae   Monilinia fructicola binarnavirus 1
3111318 3111318 PRJNA576995_P_NODE_13003_length_419_cov_1.112717_g12411_i0 PRJNA576995 13003 419 1.112717 4.66228423 Caudoviricetes sp. 2832643 Viruses Viruses 769 0   NTclustered gi|2058123527|tpg|BK033972.1| 2832643 g12411 i0 99.761 1 419 1 100 0 1 419 37657 37239 MAG TPA_asm: Caudoviricetes sp. isolate ct2Fx2, partial genome blastn 419 769 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
4388060 4388060 PRJNA576995_P_NODE_20864_length_331_cov_1.193798_g20272_i0 PRJNA576995 20864 331 1.193798 3.95147138 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 89.8 2.38e-13   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g20272 i0 100 0.145015105740181 48 0 15 0 1 48 1 48 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 48 89.8 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1
4388123 4388123 PRJNA576995_P_NODE_24084_length_311_cov_1.180672_g23492_i0 PRJNA576995 24084 311 1.180672 3.67188992 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 130 1.31e-25   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g23492 i0 100 1.54340836012862 70 0 23 0 242 311 73 4 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 480 130 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1
5664105 5664105 PRJNA576995_P_NODE_11465_length_451_cov_1.857143_g10873_i0 PRJNA576995 11465 451 1.857143 8.37571493 Pandoravirus quercus 2107709 Viruses Viruses 75 9.33e-9   NTclustered gi|1408259612|ref|NC_037667.1| 2107709 g10873 i0 82.353 0.762749445676275 85 15 20 0 43 127 1563592 1563508 Pandoravirus quercus, complete genome blastn 344 75 1 Viruses             Pandoravirus Pandoravirus quercus
5664558 5664558 PRJNA576995_P_NODE_42285_length_242_cov_0.911243_g41693_i0 PRJNA576995 42285 242 0.911243 2.20520806 Caudoviricetes sp. 2832643 Viruses Viruses 448 2.3799999999999995e-121   NTclustered gi|2058123527|tpg|BK033972.1| 2832643 g41693 i0 100 1 242 0 100 0 1 242 33250 33491 MAG TPA_asm: Caudoviricetes sp. isolate ct2Fx2, partial genome blastn 242 448 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
5664563 5664563 PRJNA576995_P_NODE_42845_length_241_cov_1.375000_g42253_i0 PRJNA576995 42845 241 1.375 3.31375 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 104 5.9e-18   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g42253 i0 100 0.609958506224066 56 0 23 0 1 56 1 56 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 147 104 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1
8213822 8213822 PRJNA576995_P_NODE_27967_length_289_cov_0.967593_g27375_i0 PRJNA576995 27967 289 0.967593 2.79634377 Caudoviricetes sp. 2832643 Viruses Viruses 518 2.19e-142   NTclustered gi|2058123527|tpg|BK033972.1| 2832643 g27375 i0 98.962 1 289 3 100 0 1 289 47547 47835 MAG TPA_asm: Caudoviricetes sp. isolate ct2Fx2, partial genome blastn 289 518 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
9489185 9489185 PRJNA576995_P_NODE_35968_length_250_cov_0.870056_g35376_i0 PRJNA576995 35968 250 0.870056 2.17514 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 80.5 1.04e-10   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g35376 i0 100 0.172 43 0 17 0 1 43 43 1 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 43 80.5 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1
12039897 12039897 PRJNA576995_P_NODE_35830_length_250_cov_0.870056_g35238_i0 PRJNA576995 35830 250 0.870056 2.17514 Caudoviricetes sp. 2832643 Viruses Viruses 462 8.83e-126   NTclustered gi|2058123527|tpg|BK033972.1| 2832643 g35238 i0 100 1.972 250 0 100 0 1 250 61026 61275 MAG TPA_asm: Caudoviricetes sp. isolate ct2Fx2, partial genome blastn 493 462 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
14589614 14589614 PRJNA576995_P_NODE_32432_length_265_cov_0.968750_g31840_i0 PRJNA576995 32432 265 0.96875 2.5671875 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 110 1.42e-19   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g31840 i0 98.387 0.577358490566038 62 1 23 0 1 62 9 70 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 153 110 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1
15863086 15863086 PRJNA576995_P_NODE_11193_length_458_cov_1.246753_g10601_i0 PRJNA576995 11193 458 1.246753 5.71012874 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 121 1.2e-22   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g10601 i0 97.222 0.943231441048035 72 1 16 1 1 71 2 73 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 432 121 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1
16439653 16439653 PRJNA576995_P_NODE_42593_length_242_cov_0.911243_g42001_i0 PRJNA576995 42593 242 0.911243 2.20520806 root 1 Root_unresolved Root_unresolved 448 2.3799999999999995e-121   NTclustered gi|429891195|gb|JX904314.1| 186617 g42001 i0 100 4.80165289256198 242 0 100 0 1 242 1120 1361 Uncultured marine virus clone GOM02859, complete genome blastn 1162 448 1 Viruses               uncultured marine virus
17138441 17138441 PRJNA576995_P_NODE_36834_length_249_cov_0.875000_g36242_i0 PRJNA576995 36834 249 0.875 2.17875 Caudoviricetes sp. 2832643 Viruses Viruses 355 1.53e-93   NTclustered gi|2052179911|tpg|BK033189.1| 2832643 g36242 i0 92.369 3.34538152610442 249 19 100 0 1 249 10204 9956 MAG TPA_asm: Caudoviricetes sp. isolate ctihF1, partial genome blastn 833 355 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
18412760 18412760 PRJNA576995_P_NODE_37435_length_248_cov_0.880000_g36843_i0 PRJNA576995 37435 248 0.88 2.1824 Caudoviricetes sp. 2832643 Viruses Viruses 254 5.73e-63   NTclustered gi|2914931478|gb|OR221588.1| 2832643 g36843 i0 87.727 1.54838709677419 220 24 88 3 32 248 6264 6483 MAG: Caudoviricetes sp. isolate MSP1479 genomic sequence blastn 384 254 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
19687006 19687006 PRJNA576995_P_NODE_16596_length_368_cov_1.332203_g16004_i0 PRJNA576995 16596 368 1.332203 4.90250704 Enterovirus alphacoxsackie 3428500 Viruses Viruses 52.8 0.035   NTclustered gi|2148068742|gb|MN541018.1| 31704 g16004 i0 100 0.0760869565217391 28 0 8 0 228 255 3424 3397 Coxsackievirus A16 strain CV-A16/SWG50/SD/CHN/2018 polyprotein gene, partial cds blastn 28 52.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Enterovirus Enterovirus alphacoxsackie
19687055 19687055 PRJNA576995_P_NODE_19756_length_339_cov_1.447368_g19164_i0 PRJNA576995 19756 339 1.447368 4.90657752 Escherichia phage megetsur 2696417 Viruses Viruses 54.7 0.009   NTclustered gi|1802641096|gb|MN850608.1| 2696417 g19164 i0 100 0.0855457227138643 29 0 9 0 76 104 23757 23785 Escherichia phage megetsur, complete genome blastn 29 54.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes Autographivirales Autoscriptoviridae Bonnellvirus Escherichia phage megetsur
20962883 20962883 PRJNA576995_P_NODE_28257_length_287_cov_1.439252_g27665_i0 PRJNA576995 28257 287 1.439252 4.13065324 Orius laevigatus associated narnavirus 2 3344919 Viruses Viruses 69.4 2.64e-7   NTclustered gi|2802859156|gb|PP908628.1| 3344919 g27665 i0 100 0.857142857142857 37 0 13 0 251 287 2450 2486 MAG: Orius laevigatus associated narnavirus 2 isolate OlaeANaV2 polyprotein gene, complete cds blastn 246 69.4 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Orius laevigatus associated narnavirus 2
20962926 20962926 PRJNA576995_P_NODE_31757_length_269_cov_1.173469_g31165_i0 PRJNA576995 31757 269 1.173469 3.15663161 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 130 1.11e-25   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g31165 i0 100 1.69516728624535 70 0 26 0 1 70 1 70 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 456 130 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1
20962945 20962945 PRJNA576995_P_NODE_33277_length_259_cov_1.870968_g32685_i0 PRJNA576995 33277 259 1.870968 4.84580712 Caudoviricetes sp. 2832643 Viruses Viruses 479 9.13e-131   NTclustered gi|2058123527|tpg|BK033972.1| 2832643 g32685 i0 100 1 259 0 100 0 1 259 38342 38084 MAG TPA_asm: Caudoviricetes sp. isolate ct2Fx2, partial genome blastn 259 479 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
23512798 23512798 PRJNA576995_P_NODE_13399_length_411_cov_1.976331_g12807_i0 PRJNA576995 13399 411 1.976331 8.12272041 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 126 2.2899999999999998e-24   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g12807 i0 96.154 1.05839416058394 78 2 19 1 1 77 1 78 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 435 126 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1
24786914 24786914 PRJNA576995_P_NODE_30440_length_276_cov_1.098522_g29848_i0 PRJNA576995 30440 276 1.098522 3.03192072 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 115 3.1900000000000003e-21   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g29848 i0 100 1.51811594202899 62 0 22 0 1 62 6 67 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 419 115 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1
24787201 24787201 PRJNA576995_P_NODE_8640_length_534_cov_1.242950_g8052_i0 PRJNA576995 8640 534 1.24295 6.637353 Caudoviricetes sp. 2832643 Viruses Viruses 987 0   NTclustered gi|2058123527|tpg|BK033972.1| 2832643 g8052 i0 100 1 534 0 100 0 1 534 40884 41417 MAG TPA_asm: Caudoviricetes sp. isolate ct2Fx2, partial genome blastn 534 987 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
26763046 26763046 PRJNA576995_P_NODE_23201_length_316_cov_1.267490_g22609_i0 PRJNA576995 23201 316 1.26749 4.0052684 Hyperionvirus sp. 2487770 Viruses Viruses 53.9 1.04e-5   NR AYV83003.1 2487770 g22609 i0 32.6 0.901898734177215 95 63 90.2 1 287 3 96 189 AYV83003.1 MAG: MAC/perforin domain protein [Hyperionvirus sp.] diamond 285 53.9 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Hyperionvirus sp.
27851107 27851107 PRJNA576995_P_NODE_29604_length_280_cov_1.487923_g29012_i0 PRJNA576995 29604 280 1.487923 4.1661844 Tupanvirus 2094720 Viruses Viruses 77.4 3.26e-14   NR YP_010780137.1 2126984 g29012 i0 43.8 2.83928571428571 89 33 87.9 3 3 248 352 430 YP_010780137.1 hypothetical protein QJ856_gp1228 [Tupanvirus deep ocean] diamond 795 77.4 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Tupanvirus Tupanvirus altamarinense
29826771 29826771 PRJNA576995_P_NODE_871_length_1548_cov_1.297627_g709_i0 PRJNA576995 871 1548 1.297627 20.08726596 Downy mildew lesion associated ormycovirus 6 3162774 Viruses Viruses 473 1.0799999999999998e-154   NR USW07198.1 3162774 g709 i0 46.4 0.994186046511628 513 269 98.4 4 23 1546 47 558 USW07198.1 putative RNA-dependent RNA polymerase [Downy mildew lesion associated ormycovirus 6] diamond 1539 473 1 Viruses               Downy mildew lesion associated ormycovirus 6
30237564 30237564 PRJNA576995_P_NODE_21992_length_323_cov_2.344000_g21400_i0 PRJNA576995 21992 323 2.344 7.57112 African cichlid piscichuvirus 3065075 Viruses Viruses 89 5.99e-18   NR WLN26256.1 3065075 g21400 i0 54.2 0.770897832817337 83 38 77.1 0 71 319 229 311 WLN26256.1 MAG: L protein, partial [African cichlid piscichuvirus] diamond 249 89 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus African cichlid piscichuvirus
30837851 30837851 PRJNA576995_P_NODE_15154_length_385_cov_2.669872_g14562_i0 PRJNA576995 15154 385 2.669872 10.2790072 Hebei tick virus 12 3371291 Viruses Viruses 59.3 3.03e-7   NR XHY85231.1 3371291 g14562 i0 29.1 2.1974025974026 141 86 99 2 5 385 211 351 XHY85231.1 MAG: putative RNA-dependent RNA polymerase, partial [Hebei tick virus 12] diamond 846 59.3 1 Viruses               Hebei tick virus 12
32766122 32766122 PRJNA576995_P_NODE_22260_length_322_cov_1.132530_g21668_i0 PRJNA576995 22260 322 1.13253 3.6467466 Downy mildew lesion associated ormycovirus 6 3162774 Viruses Viruses 103 5.61e-23   NR USW07198.1 3162774 g21668 i0 45.1 0.950310559006211 102 56 95 0 3 308 597 698 USW07198.1 putative RNA-dependent RNA polymerase [Downy mildew lesion associated ormycovirus 6] diamond 306 103 1 Viruses               Downy mildew lesion associated ormycovirus 6

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;