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contig_metadata

29 rows where bioproject = "PRJNA576995" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 29 ✖

tax_clade 1

bioproject 1

  • PRJNA576995 · 29 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4387988 4387988 PRJNA576995_P_NODE_17184_length_362_cov_1.000000_g16592_i0 PRJNA576995 17184 362 1 3.62 archaeon 1906665 Archaea Archaea 198 4.85e-62   NR RYG65124.1 1906665 g16592 i0 91.3 0.853591160220994 103 9 85.4 0 3 311 113 215 RYG65124.1 MAG: 30S ribosomal protein S5 [archaeon] diamond 309 198 1 Archaea               archaeon
6938953 6938953 PRJNA576995_P_NODE_36206_length_250_cov_0.870056_g35614_i0 PRJNA576995 36206 250 0.870056 2.17514 archaeon 1906665 Archaea Archaea 156 1.6e-43   NR RYH13265.1 1906665 g35614 i0 94 1.992 83 5 99.6 0 250 2 156 238 RYH13265.1 MAG: F0F1 ATP synthase subunit alpha [archaeon] diamond 498 156 1 Archaea               archaeon
6939020 6939020 PRJNA576995_P_NODE_42586_length_242_cov_0.911243_g41994_i0 PRJNA576995 42586 242 0.911243 2.20520806 archaeon 1906665 Archaea Archaea 150 3.1299999999999996e-45   NR RYG94801.1 1906665 g41994 i0 91.9 0.91735537190082606 74 6 91.7 0 222 1 3 76 RYG94801.1 MAG: c-type cytochrome [archaeon] diamond 222 150 1 Archaea               archaeon
27427468 27427468 PRJNA576995_P_NODE_40123_length_245_cov_0.895349_g39531_i0 PRJNA576995 40123 245 0.895349 2.19360505 archaeon 1906665 Archaea Archaea 92.8 1.39e-21   NR RYH05912.1 1906665 g39531 i0 53.1 0.991836734693878 81 38 99.2 0 2 244 7 87 RYH05912.1 MAG: hypothetical protein EON65_43550 [archaeon] diamond 243 92.8 1 Archaea               archaeon
27680143 27680143 PRJNA576995_P_NODE_28684_length_285_cov_1.429245_g28092_i0 PRJNA576995 28684 285 1.429245 4.07334825 archaeon 1906665 Archaea Archaea 89.4 9.35e-19   NR RYG58440.1 1906665 g28092 i0 52 2.07368421052632 102 39 100 3 1 285 62 160 RYG58440.1 MAG: hypothetical protein EON64_21325, partial [archaeon] diamond 591 89.4 1 Archaea               archaeon
28121879 28121879 PRJNA576995_P_NODE_43305_length_241_cov_0.916667_g42713_i0 PRJNA576995 43305 241 0.916667 2.20916747 archaeon 1906665 Archaea Archaea 46.2 0.00201   NR RYG61912.1 1906665 g42713 i0 34.4 0.796680497925311 64 42 79.7 0 224 33 53 116 RYG61912.1 MAG: hypothetical protein EON64_18270, partial [archaeon] diamond 192 46.2 1 Archaea               archaeon
28500840 28500840 PRJNA576995_P_NODE_36047_length_250_cov_0.870056_g35455_i0 PRJNA576995 36047 250 0.870056 2.17514 archaeon 1906665 Archaea Archaea 94.4 1.2800000000000001e-22   NR RYY88891.1 1906665 g35455 i0 51.9 0.972 81 39 97.2 0 6 248 45 125 RYY88891.1 MAG: hypothetical protein EON63_01590 [archaeon] diamond 243 94.4 1 Archaea               archaeon
28595643 28595643 PRJNA576995_P_NODE_31347_length_271_cov_1.166667_g30755_i0 PRJNA576995 31347 271 1.166667 3.16166757 Candidatus Nanoarchaeia archaeon 2910166 Archaea Archaea 40 0.0485   NR MEM4714331.1 2910166 g30755 i0 31.4 0.564575645756458 51 34 56.5 1 240 88 1 50 MEM4714331.1 hypothetical protein [Candidatus Nanoarchaeia archaeon] diamond 153 40 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia       Candidatus Nanoarchaeia archaeon
28879546 28879546 PRJNA576995_P_NODE_35128_length_251_cov_0.865169_g34536_i0 PRJNA576995 35128 251 0.865169 2.17157419 archaeon 1906665 Archaea Archaea 106 1.35e-24   NR RYG67246.1 1906665 g34536 i0 55.4 0.99203187250996006 83 37 99.2 0 3 251 538 620 RYG67246.1 MAG: hypothetical protein EON64_07870 [archaeon] diamond 249 106 1 Archaea               archaeon
28879552 28879552 PRJNA576995_P_NODE_38568_length_247_cov_0.885057_g37976_i0 PRJNA576995 38568 247 0.885057 2.18609079 archaeon 1906665 Archaea Archaea 91.3 1.8300000000000003e-21   NR RYG67867.1 1906665 g37976 i0 54.1 0.898785425101215 74 34 89.9 0 22 243 41 114 RYG67867.1 MAG: hypothetical protein EON64_06485, partial [archaeon] diamond 222 91.3 1 Archaea               archaeon
29195517 29195517 PRJNA576995_P_NODE_37649_length_248_cov_0.880000_g37057_i0 PRJNA576995 37649 248 0.88 2.1824 archaeon 1906665 Archaea Archaea 94 1.7400000000000003e-21   NR RYG58925.1 1906665 g37057 i0 79.6 0.653225806451613 54 11 65.3 0 246 85 168 221 RYG58925.1 MAG: 30S ribosomal protein S2, partial [archaeon] diamond 162 94 1 Archaea               archaeon
29605488 29605488 PRJNA576995_P_NODE_28450_length_286_cov_1.446009_g27858_i0 PRJNA576995 28450 286 1.446009 4.13558574 Halapricum salinum 1457250 Archaea Archaea 59.3 9.03e-8   NR WP_237560461.1 1457250 g27858 i0 35.2 4.67832167832168 91 59 95.5 0 12 284 71 161 WP_237560461.1 DUF4397 domain-containing protein [Halapricum salinum] diamond 1338 59.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halapricum Halapricum salinum
29826748 29826748 PRJNA576995_P_NODE_22891_length_318_cov_1.228571_g22299_i0 PRJNA576995 22891 318 1.228571 3.90685578 archaeon 1906665 Archaea Archaea 52.4 3.99e-5   NR MDP2435053.1 1906665 g22299 i0 25.7 1.02830188679245 109 60 83 2 297 34 401 509 MDP2435053.1 hypothetical protein [archaeon] diamond 327 52.4 1 Archaea               archaeon
29858371 29858371 PRJNA576995_P_NODE_34951_length_251_cov_0.865169_g34359_i0 PRJNA576995 34951 251 0.865169 2.17157419 archaeon 1906665 Archaea Archaea 124 2.48e-33   NR RYH13044.1 1906665 g34359 i0 74.4 0.9800796812749 82 21 98 0 250 5 92 173 RYH13044.1 MAG: hypothetical protein EON65_36625 [archaeon] diamond 246 124 1 Archaea               archaeon
29953226 29953226 PRJNA576995_P_NODE_40851_length_244_cov_0.900585_g40259_i0 PRJNA576995 40851 244 0.900585 2.1974274 archaeon 1906665 Archaea Archaea 58.9 7.27e-8   NR RYH20076.1 1906665 g40259 i0 33.8 0.983606557377049 80 52 98.4 1 2 241 254 332 RYH20076.1 MAG: APC family permease [archaeon] diamond 240 58.9 1 Archaea               archaeon
30174333 30174333 PRJNA576995_P_NODE_43532_length_241_cov_0.875000_g42940_i0 PRJNA576995 43532 241 0.875 2.10875 archaeon 1906665 Archaea Archaea 117 3.28e-31   NR RYG70423.1 1906665 g42940 i0 74.4 0.970954356846473 78 20 97.1 0 235 2 11 88 RYG70423.1 MAG: hypothetical protein EON64_00220 [archaeon] diamond 234 117 1 Archaea               archaeon
30711468 30711468 PRJNA576995_P_NODE_34334_length_252_cov_1.737430_g33742_i0 PRJNA576995 34334 252 1.73743 4.3783236 archaeon 1906665 Archaea Archaea 106 3.69e-27   NR RYY77413.1 1906665 g33742 i0 71 0.821428571428571 69 20 82.1 0 209 3 21 89 RYY77413.1 MAG: hypothetical protein EON63_18850 [archaeon] diamond 207 106 1 Archaea               archaeon
30743074 30743074 PRJNA576995_P_NODE_40894_length_244_cov_0.900585_g40302_i0 PRJNA576995 40894 244 0.900585 2.1974274 archaeon 1906665 Archaea Archaea 84 5.35e-18   NR RYH29125.1 1906665 g40302 i0 52.5 0.983606557377049 80 38 98.4 0 2 241 37 116 RYH29125.1 MAG: hypothetical protein EON65_09570 [archaeon] diamond 240 84 1 Archaea               archaeon
30869406 30869406 PRJNA576995_P_NODE_40994_length_244_cov_0.900585_g40402_i0 PRJNA576995 40994 244 0.900585 2.1974274 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 43.9 0.00358   NR TFF93721.1 2053491 g40402 i0 45.2 0.516393442622951 42 23 51.6 0 227 102 66 107 TFF93721.1 MAG: hypothetical protein EU546_05860 [Candidatus Thorarchaeota archaeon] diamond 126 43.9 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon
30946354 30946354 PRJNA576995_P_NODE_15214_length_385_cov_0.987179_g14622_i0 PRJNA576995 15214 385 0.987179 3.80063915 root 1 Root_unresolved Root_unresolved 159 2.52e-44   NR OGS40195.1 1797976 g14622 i0 53.5 6.92727272727273 127 59 99 0 2 382 80 206 OGS40195.1 MAG: ATPase [Euryarchaeota archaeon RBG_13_31_8] diamond 2667 160 0.99375 Archaea   Methanobacteriati Methanobacteriota         Euryarchaeota archaeon RBG_13_31_8
31343603 31343603 PRJNA576995_P_NODE_39736_length_246_cov_0.890173_g39144_i0 PRJNA576995 39736 246 0.890173 2.18982558 archaeon 1906665 Archaea Archaea 65.5 1.35e-11   NR MCQ2818075.1 1906665 g39144 i0 61.2 0.597560975609756 49 19 59.8 0 73 219 19 67 MCQ2818075.1 HMG-box domain-containing protein [archaeon] diamond 147 65.5 1 Archaea               archaeon
31628176 31628176 PRJNA576995_P_NODE_34076_length_254_cov_1.585635_g33484_i0 PRJNA576995 34076 254 1.585635 4.0275129 archaeon 1906665 Archaea Archaea 113 4.479999999999999e-28   NR MDP2439249.1 1906665 g33484 i0 69.7 0.897637795275591 76 23 89.8 0 25 252 14 89 MDP2439249.1 MC/SLC25 family protein [archaeon] diamond 228 113 1 Archaea               archaeon
31628181 31628181 PRJNA576995_P_NODE_36756_length_249_cov_0.875000_g36164_i0 PRJNA576995 36756 249 0.875 2.17875 archaeon 1906665 Archaea Archaea 125 2.83e-32   NR RYY85530.1 1906665 g36164 i0 70 0.963855421686747 80 24 96.4 0 241 2 104 183 RYY85530.1 MAG: hypothetical protein EON63_07335 [archaeon] diamond 240 125 1 Archaea               archaeon
31691451 31691451 PRJNA576995_P_NODE_40097_length_245_cov_0.895349_g39505_i0 PRJNA576995 40097 245 0.895349 2.19360505 archaeon 1906665 Archaea Archaea 107 4.63e-26   NR RYH04926.1 1906665 g39505 i0 77.1 1.71428571428571 70 16 85.7 0 211 2 1 70 RYH04926.1 MAG: 50S ribosomal protein L10, partial [archaeon] diamond 420 107 1 Archaea               archaeon
31881100 31881100 PRJNA576995_P_NODE_37797_length_248_cov_0.880000_g37205_i0 PRJNA576995 37797 248 0.88 2.1824 Halomicrococcus gelatinilyticus 1702103 Archaea Archaea 43.9 0.0155   NR WP_327052101.1 1702103 g37205 i0 35.3 1.8508064516129 51 33 61.7 0 50 202 206 256 WP_327052101.1 hydantoinase/oxoprolinase family protein [Halomicrococcus gelatinilyticus] diamond 459 43.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haladaptataceae Halomicrococcus Halomicrococcus gelatinilyticus
31912902 31912902 PRJNA576995_P_NODE_38677_length_247_cov_0.885057_g38085_i0 PRJNA576995 38677 247 0.885057 2.18609079 archaeon 1906665 Archaea Archaea 61.6 3.52e-9   NR RYH06819.1 1906665 g38085 i0 71.8 0.473684210526316 39 11 47.4 0 119 3 16 54 RYH06819.1 MAG: EF-hand domain-containing protein [archaeon] diamond 117 61.6 1 Archaea               archaeon
32306441 32306441 PRJNA576995_P_NODE_14099_length_400_cov_1.177370_g13507_i0 PRJNA576995 14099 400 1.17737 4.70948 Methanoregula 395331 Archaea Archaea 51.6 1.06e-4   NR MDD1692274.1 2052170 g13507 i0 50 0.915 54 23 39.8 3 394 236 62 112 MDD1692274.1 hypothetical protein [Methanoregula sp.] diamond 366 51.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula Methanoregula sp.
32356152 32356152 PRJNA576995_P_NODE_43299_length_241_cov_0.916667_g42707_i0 PRJNA576995 43299 241 0.916667 2.20916747 Haloterrigena sp. H1 2552943 Archaea Archaea 42.4 0.0474   NR WP_138782825.1 2552943 g42707 i0 48.8 0.510373443983402 41 21 51 0 11 133 37 77 WP_138782825.1 CPBP family intramembrane glutamic endopeptidase [Haloterrigena sp. H1] diamond 123 42.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Haloterrigena Haloterrigena sp. H1
32419244 32419244 PRJNA576995_P_NODE_34979_length_251_cov_0.865169_g34387_i0 PRJNA576995 34979 251 0.865169 2.17157419 archaeon 1906665 Archaea Archaea 138 7.57e-36   NR RYH23131.1 1906665 g34387 i0 78.6 1.00398406374502 84 17 99.2 1 2 250 565 648 RYH23131.1 MAG: hypothetical protein EON65_18260 [archaeon] diamond 252 138 1 Archaea               archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;