RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA576995" and tax_phylum = "Rhodothermota"

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tax_superkingdom 1

tax_phylum 1

  • Rhodothermota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA576995 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18412824 18412824 PRJNA576995_P_NODE_42075_length_242_cov_1.431953_g41483_i0 PRJNA576995 42075 242 1.431953 3.46532626 Rubricoccaceae bacterium 2838334 Bacteria Bacteria 127 5.88e-33   NR HEX9953485.1 2838334 g41483 i0 72.5 2.97520661157025 80 22 99.2 0 2 241 164 243 HEX9953485.1 fumarylacetoacetase [Rubricoccaceae bacterium] diamond 720 127 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae   Rubricoccaceae bacterium
27079572 27079572 PRJNA576995_P_NODE_33542_length_258_cov_1.167568_g32950_i0 PRJNA576995 33542 258 1.167568 3.01232544 Rhodothermaceae bacterium 2026787 Bacteria Bacteria 112 8.310000000000001e-27   NR MBX2822304.1 2026787 g32950 i0 60.5 2 86 33 100 1 258 1 123 207 MBX2822304.1 bifunctional sulfate adenylyltransferase/adenylylsulfate kinase [Rhodothermaceae bacterium] diamond 516 112 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rhodothermaceae   Rhodothermaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;