RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA576995" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA576995 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20963010 20963010 PRJNA576995_P_NODE_38117_length_248_cov_0.880000_g37525_i0 PRJNA576995 38117 248 0.88 2.1824 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 65.5 1.13e-11   NR KAF4734066.1 32597 g37525 i0 46.3 3.79838709677419 67 32 81 2 201 1 6 68 KAF4734066.1 hypothetical protein FOZ63_022705, partial [Perkinsus olseni] diamond 942 65.5 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
26966530 26966530 PRJNA576995_P_NODE_41862_length_243_cov_0.905882_g41270_i0 PRJNA576995 41862 243 0.905882 2.20129326 Perkinsus 28000 SAR_Eukaryotes SAR_Eukaryotes 43.1 0.021   NR KAF4706028.1 32597 g41270 i0 47.5 2.11111111111111 61 30 72.8 2 202 26 104 164 KAF4706028.1 hypothetical protein FOZ63_004328, partial [Perkinsus olseni] diamond 513 43.1 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
32274720 32274720 PRJNA576995_P_NODE_38418_length_247_cov_0.885057_g37826_i0 PRJNA576995 38418 247 0.885057 2.18609079 Dinophyceae 2864 SAR_Eukaryotes SAR_Eukaryotes 101 4.3999999999999986e-24   NR KAF4756788.1 32597 g37826 i0 63.4 11.9635627530364 82 27 99.6 2 246 1 52 130 KAF4756788.1 hypothetical protein FOZ63_001655, partial [Perkinsus olseni] diamond 2955 102 0.990196078431373 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;