contig_metadata
5 rows where bioproject = "PRJNA576995" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12039720 | 12039720 | PRJNA576995_P_NODE_23010_length_317_cov_1.577869_g22418_i0 | PRJNA576995 | 23010 | 317 | 1.577869 | 5.00184473 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 399 | 9.21e-107 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g22418 | i0 | 89.655 | 26.7287066246057 | 319 | 26 | 99 | 6 | 2 | 317 | 1903184 | 1903498 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 8473 | 399 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 14589573 | 14589573 | PRJNA576995_P_NODE_29632_length_280_cov_1.458937_g29040_i0 | PRJNA576995 | 29632 | 280 | 1.458937 | 4.0850236 | Longimicrobiaceae bacterium | 3047548 | Bacteria | Bacteria | 98.2 | 1.08e-21 | NR | MFL5386477.1 | 3047548 | g29040 | i0 | 84.1 | 0.675 | 63 | 10 | 67.5 | 0 | 278 | 90 | 15 | 77 | MFL5386477.1 IS21 family transposase [Longimicrobiaceae bacterium] | diamond | 189 | 98.2 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobiaceae bacterium | ||
| 22237831 | 22237831 | PRJNA576995_P_NODE_32878_length_262_cov_1.222222_g32286_i0 | PRJNA576995 | 32878 | 262 | 1.222222 | 3.20222164 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 355 | 1.63e-93 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g32286 | i0 | 91.255 | 132.030534351145 | 263 | 20 | 100 | 3 | 1 | 262 | 172076 | 172336 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 34592 | 355 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 30995920 | 30995920 | PRJNA576995_P_NODE_24854_length_306_cov_1.364807_g24262_i0 | PRJNA576995 | 24854 | 306 | 1.364807 | 4.17630942 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 135 | 1.81e-35 | NR | HSB53493.1 | 2448054 | g24262 | i0 | 65.3 | 5.68627450980392 | 95 | 33 | 93.1 | 0 | 3 | 287 | 312 | 406 | HSB53493.1 aspartate aminotransferase family protein [Gemmatimonadales bacterium] | diamond | 1740 | 135 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 32829264 | 32829264 | PRJNA576995_P_NODE_18220_length_352_cov_1.003584_g17628_i0 | PRJNA576995 | 18220 | 352 | 1.003584 | 3.53261568 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 47.4 | 0.00294 | NR | NNE08319.1 | 2026742 | g17628 | i0 | 33 | 1.53409090909091 | 91 | 50 | 69.9 | 2 | 99 | 344 | 41 | 129 | NNE08319.1 T9SS type A sorting domain-containing protein [Gemmatimonadota bacterium] | diamond | 540 | 47.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;