RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA576995" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA576995 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5664485 5664485 PRJNA576995_P_NODE_35105_length_251_cov_0.865169_g34513_i0 PRJNA576995 35105 251 0.865169 2.17157419 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 136 1.24e-35   NR ETO21811.1 46433 g34513 i0 80.7 49.0398406374502 83 16 99.2 0 2 250 31 113 ETO21811.1 chaperonin containing t-complex protein 1, zeta subunit, tcpz [Reticulomyxa filosa] diamond 12309 137 0.992700729927007 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
30332793 30332793 PRJNA576995_P_NODE_15212_length_385_cov_1.096154_g14620_i0 PRJNA576995 15212 385 1.096154 4.2201929 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 54.7 9.61e-6   NR ETO05805.1 46433 g14620 i0 35.4 0.771428571428571 99 64 77.1 0 381 85 145 243 ETO05805.1 hypothetical protein RFI_31587, partial [Reticulomyxa filosa] diamond 297 54.7 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;