RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA576995" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 8 ✖

tax_kingdom 1

bioproject 1

  • PRJNA576995 · 8 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26699563 26699563 PRJNA576995_P_NODE_42421_length_242_cov_0.911243_g41829_i0 PRJNA576995 42421 242 0.911243 2.20520806 Chloroflexota bacterium 2026724 Bacteria Bacteria 41.6 0.0284   NR MCH9009200.1 2026724 g41829 i0 34.7 0.929752066115702 75 48 93 1 241 17 27 100 MCH9009200.1 hypothetical protein [Chloroflexota bacterium] diamond 225 41.6 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
27332617 27332617 PRJNA576995_P_NODE_19643_length_340_cov_1.198502_g19051_i0 PRJNA576995 19643 340 1.198502 4.0749068 Dehalococcoidales bacterium 2026733 Bacteria Bacteria 44.7 0.0198   NR NLE09177.1 2026733 g19051 i0 34.5 0.485294117647059 55 32 45 1 275 123 201 255 NLE09177.1 4Fe-4S binding protein [Dehalococcoidales bacterium] diamond 165 44.7 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia Dehalococcoidales     Dehalococcoidales bacterium
29605490 29605490 PRJNA576995_P_NODE_29470_length_281_cov_1.235577_g28878_i0 PRJNA576995 29470 281 1.235577 3.47197137 Chloroflexota bacterium 2026724 Bacteria Bacteria 47 2.29e-4   NR MCX6067226.1 2026724 g28878 i0 39.6 1.00355871886121 48 27 49.1 1 1 138 22 69 MCX6067226.1 hypothetical protein [Chloroflexota bacterium] diamond 282 47 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30174304 30174304 PRJNA576995_P_NODE_23712_length_313_cov_1.283333_g23120_i0 PRJNA576995 23712 313 1.283333 4.01683229 Chloroflexota bacterium 2026724 Bacteria Bacteria 98.2 1.19e-23   NR MEZ4515128.1 2026724 g23120 i0 46.5 0.968051118210863 101 53 95.8 1 9 308 6 106 MEZ4515128.1 coactosin family protein [Chloroflexota bacterium] diamond 303 98.2 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31121844 31121844 PRJNA576995_P_NODE_25775_length_301_cov_1.241228_g25183_i0 PRJNA576995 25775 301 1.241228 3.73609628 Chloroflexia bacterium 2448782 Bacteria Bacteria 63.5 3.28e-9   NR HEX6606660.1 2448782 g25183 i0 44.7 1.71428571428571 85 42 80.7 3 51 293 149 232 HEX6606660.1 choice-of-anchor A family protein [Chloroflexia bacterium] diamond 516 63.5 1 Bacteria   Bacillati Chloroflexota Chloroflexia       Chloroflexia bacterium
31470242 31470242 PRJNA576995_P_NODE_38836_length_247_cov_0.885057_g38244_i0 PRJNA576995 38836 247 0.885057 2.18609079 Chloroflexota bacterium 2026724 Bacteria Bacteria 45.1 0.00598   NR MCI0714467.1 2026724 g38244 i0 44.7 1.1417004048583 47 26 57.1 0 106 246 21 67 MCI0714467.1 VWA domain-containing protein [Chloroflexota bacterium] diamond 282 45.1 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
32071104 32071104 PRJNA576995_P_NODE_42898_length_241_cov_0.940476_g42306_i0 PRJNA576995 42898 241 0.940476 2.26654716 Anaerolineales bacterium 2073117 Bacteria Bacteria 42.7 0.0281   NR HLO30724.1 2073117 g42306 i0 39.6 0.597510373443983 48 29 59.8 0 29 172 36 83 HLO30724.1 ABC transporter permease [Anaerolineales bacterium] diamond 144 42.7 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
32356148 32356148 PRJNA576995_P_NODE_37339_length_248_cov_0.994286_g36747_i0 PRJNA576995 37339 248 0.994286 2.46582928 Anaerolineae bacterium 2052143 Bacteria Bacteria 79.7 3.05e-15   NR MCC6897029.1 2052143 g36747 i0 50 6.61693548387097 78 38 94.4 1 234 1 125 201 MCC6897029.1 cellulase family glycosylhydrolase [Anaerolineae bacterium] diamond 1641 79.7 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;