contig_metadata
5 rows where bioproject = "PRJNA576995", tax_kingdom = "Pseudomonadati" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4965061 | 4965061 | PRJNA576995_P_NODE_31984_length_267_cov_1.969072_g31392_i0 | PRJNA576995 | 31984 | 267 | 1.969072 | 5.25742224 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 52.8 | 0.024 | NTclustered | gi|779731694|gb|CP010430.1| | 35554 | g31392 | i0 | 100 | 0.838951310861423 | 28 | 0 | 10 | 0 | 208 | 235 | 2351236 | 2351263 | Geobacter sulfurreducens strain AM-1 genome | blastn | 224 | 52.8 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter sulfurreducens | ||
| 10765140 | 10765140 | PRJNA576995_P_NODE_40749_length_244_cov_0.900585_g40157_i0 | PRJNA576995 | 40749 | 244 | 0.900585 | 2.1974274 | Thermodesulfobacteriota bacterium | 2202153 | Bacteria | Bacteria | 157 | 4.73e-44 | NR | MEW6298246.1 | 2202153 | g40157 | i0 | 95.1 | 196.118852459016 | 81 | 4 | 99.6 | 0 | 244 | 2 | 299 | 379 | MEW6298246.1 NADP-dependent isocitrate dehydrogenase [Thermodesulfobacteriota bacterium] | diamond | 47853 | 157 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteriota bacterium | ||||||
| 28595628 | 28595628 | PRJNA576995_P_NODE_17047_length_363_cov_1.493103_g16455_i0 | PRJNA576995 | 17047 | 363 | 1.493103 | 5.41996389 | Geobacter argillaceus | 345631 | Bacteria | Bacteria | 50.8 | 9.14e-6 | NR | WP_145024538.1 | 345631 | g16455 | i0 | 51.2 | 0.355371900826446 | 43 | 21 | 35.5 | 0 | 216 | 344 | 5 | 47 | WP_145024538.1 hypothetical protein [Geobacter argillaceus] | diamond | 129 | 50.8 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter argillaceus | ||
| 28595657 | 28595657 | PRJNA576995_P_NODE_42587_length_242_cov_0.911243_g41995_i0 | PRJNA576995 | 42587 | 242 | 0.911243 | 2.20520806 | Humidesulfovibrio sp. | 2910988 | Bacteria | Bacteria | 42.7 | 0.0332 | NR | MDR3641709.1 | 2910988 | g41995 | i0 | 37.1 | 0.867768595041322 | 70 | 32 | 78.1 | 3 | 208 | 20 | 32 | 96 | MDR3641709.1 methyltransferase [Humidesulfovibrio sp.] | diamond | 210 | 42.7 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Humidesulfovibrio | Humidesulfovibrio sp. | ||
| 29353386 | 29353386 | PRJNA576995_P_NODE_43589_length_233_cov_2.406250_g42997_i0 | PRJNA576995 | 43589 | 233 | 2.40625 | 5.6065625 | Desulfobacter curvatus | 2290 | Bacteria | Bacteria | 78.2 | 1.1e-14 | NR | WP_020588914.1 | 2290 | g42997 | i0 | 48.7 | 1.00429184549356 | 78 | 37 | 99.1 | 2 | 3 | 233 | 2421 | 2496 | WP_020588914.1 non-ribosomal peptide synthetase [Desulfobacter curvatus] | diamond | 234 | 78.2 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacteraceae | Desulfobacter | Desulfobacter curvatus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;