contig_metadata
2 rows where bioproject = "PRJNA576995", tax_kingdom = "Pseudomonadati" and tax_phylum = "Campylobacterota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29429723 | 29429723 | PRJNA576995_P_NODE_36309_length_250_cov_0.870056_g35717_i0 | PRJNA576995 | 36309 | 250 | 0.870056 | 2.17514 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 108 | 2.73e-25 | NR | KIM06943.1 | 1539064 | g35717 | i0 | 63.3 | 1.932 | 79 | 29 | 94.8 | 0 | 239 | 3 | 49 | 127 | KIM06943.1 MAG: hypothetical protein KU29_07930 [Sulfurovum sp. FS06-10] | diamond | 483 | 108 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurovaceae | Sulfurovum | Sulfurovum sp. FS06-10 | ||
| 29574050 | 29574050 | PRJNA576995_P_NODE_36810_length_249_cov_0.875000_g36218_i0 | PRJNA576995 | 36810 | 249 | 0.875 | 2.17875 | Helicobacter pylori | 210 | Bacteria | Bacteria | 43.5 | 0.0164 | NR | GAA9176738.1 | 210 | g36218 | i0 | 54.5 | 0.795180722891566 | 33 | 15 | 39.8 | 0 | 203 | 105 | 76 | 108 | GAA9176738.1 hypothetical protein Kyoto193A_1060 [Helicobacter pylori] | diamond | 198 | 43.5 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;