RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA576995", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 9 ✖

tax_kingdom 1

  • Metazoa · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA576995 · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1836311 1836311 PRJNA576995_P_NODE_43122_length_241_cov_0.916667_g42530_i0 PRJNA576995 43122 241 0.916667 2.20916747 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 52.8 0.022   NTclustered gi|687385576|emb|LK731256.1| 57078 g42530 i0 100 0.116182572614108 28 0 12 0 106 133 640 613 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_scaffold0304192 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
3111769 3111769 PRJNA576995_P_NODE_42343_length_242_cov_0.911243_g41751_i0 PRJNA576995 42343 242 0.911243 2.20520806 Anindobothrium carrioni 2034265 Platyhelminthes Platyhelminthes 141 4.52e-29   NTclustered gi|1251949242|gb|MF947551.1| 2034265 g41751 i0 84.615 4.16115702479339 143 20 59 2 1 142 143 2 Anindobothrium carrioni voucher MZUSP:7787 calmodulin (cam) gene, partial cds blastn 1007 141 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Phyllobothriidea Phyllobothriidae Anindobothrium Anindobothrium carrioni
7514817 7514817 PRJNA576995_P_NODE_35546_length_250_cov_0.870056_g34954_i0 PRJNA576995 35546 250 0.870056 2.17514 Metazoa 33208 Platyhelminthes Platyhelminthes 58.4 4.87e-4   NTclustered gi|687155381|emb|LN004848.1| 99802 g34954 i0 94.737 4.684 38 1 15 1 4 40 14633 14670 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0004804 blastn 1171 58.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
18412406 18412406 PRJNA576995_P_NODE_15075_length_387_cov_0.974522_g14483_i0 PRJNA576995 15075 387 0.974522 3.77140014 Cichlidogyrus casuarinus 1844966 Platyhelminthes Platyhelminthes 112 2.12e-26   NR KAL3315165.1 1844966 g14483 i0 67.5 1.24806201550388 80 26 62 0 385 146 331 410 KAL3315165.1 hypothetical protein Ciccas_006212 [Cichlidogyrus casuarinus] diamond 483 112 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Dactylogyridea Ancyrocephalidae Cichlidogyrus Cichlidogyrus casuarinus
28027247 28027247 PRJNA576995_P_NODE_42505_length_242_cov_0.911243_g41913_i0 PRJNA576995 42505 242 0.911243 2.20520806 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 52 2.09e-5   NR PAA64129.1 282301 g41913 i0 36.7 1.95867768595041 79 46 95.5 2 234 4 2737 2813 PAA64129.1 hypothetical protein BOX15_Mlig007489g2, partial [Macrostomum lignano] diamond 474 52 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
28514299 28514299 PRJNA576995_P_NODE_26727_length_295_cov_1.387387_g26135_i0 PRJNA576995 26727 295 1.387387 4.09279165 Metazoa 33208 Platyhelminthes Platyhelminthes 65.5 7.29e-10   NR VDM33595.1 6205 g26135 i0 48.6 5.63389830508475 72 35 73.2 2 80 295 139 208 VDM33595.1 unnamed protein product [Hydatigera taeniaeformis] diamond 1662 65.9 0.993930197268589 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Hydatigera Hydatigera taeniaeformis
28532490 28532490 PRJNA576995_P_NODE_33907_length_255_cov_1.692308_g33315_i0 PRJNA576995 33907 255 1.692308 4.3153854 Mesocestoides corti 53468 Platyhelminthes Platyhelminthes 50.4 7.31e-5   NR VDD80102.1 53468 g33315 i0 43.4 0.623529411764706 53 29 61.2 1 88 243 182 234 VDD80102.1 unnamed protein product [Mesocestoides corti] diamond 159 50.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Mesocestoididae Mesocestoides Mesocestoides corti
29682199 29682199 PRJNA576995_P_NODE_38410_length_247_cov_0.885057_g37818_i0 PRJNA576995 38410 247 0.885057 2.18609079 root 1 Root_unresolved Root_unresolved 52.8 1.16e-5   NR CAH8560015.1 57078 g37818 i0 34.3 3.30364372469636 67 44 81.4 0 235 35 422 488 CAH8560015.1 unnamed protein product [Dicrocoelium dendriticum] diamond 816 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
29700166 29700166 PRJNA576995_P_NODE_22070_length_323_cov_1.232000_g21478_i0 PRJNA576995 22070 323 1.232 3.97936 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 151 6.72e-45   NR AAY97887.1 6182 g21478 i0 71 0.993808049535604 107 31 99.4 0 321 1 9 115 AAY97887.1 unknown [Schistosoma japonicum] diamond 321 151 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;