RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA576995", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 5 ✖

tax_kingdom 1

  • Metazoa · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA576995 · 5 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6938888 6938888 PRJNA576995_P_NODE_31986_length_267_cov_1.891753_g31394_i0 PRJNA576995 31986 267 1.891753 5.05098051 Metazoa 33208 Echinodermata other_Eukaryota 139 1.7e-37   NR XP_038045153.1 46514 g31394 i0 73.3 24.3820224719101 86 23 96.6 0 8 265 188 273 XP_038045153.1 guanine nucleotide-binding protein alpha-2 subunit-like [Patiria miniata] diamond 6510 139 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
7514810 7514810 PRJNA576995_P_NODE_33466_length_258_cov_1.567568_g32874_i0 PRJNA576995 33466 258 1.567568 4.04432544 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 108 1.77e-25   NR XP_033634036.1 7604 g32874 i0 57.6 4.91860465116279 85 36 98.8 0 2 256 354 438 XP_033634036.1 protein disulfide-isomerase A3-like [Asterias rubens] diamond 1269 109 0.990825688073395 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
27155979 27155979 PRJNA576995_P_NODE_39822_length_245_cov_1.343023_g39230_i0 PRJNA576995 39822 245 1.343023 3.29040635 Metazoa 33208 Echinodermata other_Eukaryota 69.7 1.78e-12   NR XP_038068194.1 46514 g39230 i0 55.9 2.21632653061224 59 26 72.2 0 239 63 1 59 XP_038068194.1 myophilin-like [Patiria miniata] diamond 543 70.1 0.994293865905849 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
28406087 28406087 PRJNA576995_P_NODE_41806_length_243_cov_0.905882_g41214_i0 PRJNA576995 41806 243 0.905882 2.20129326 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 47.4 8.42e-4   NR KAJ8033009.1 206669 g41214 i0 75 3.37037037037037 24 6 29.6 0 76 5 323 346 KAJ8033009.1 Ornithine decarboxylase [Holothuria leucospilota] diamond 819 47.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
30269429 30269429 PRJNA576995_P_NODE_42572_length_242_cov_0.911243_g41980_i0 PRJNA576995 42572 242 0.911243 2.20520806 Acanthaster planci 133434 Echinodermata other_Eukaryota 67.4 7.77e-11   NR XP_022100379.1 133434 g41980 i0 44 1.8595041322314 75 42 93 0 241 17 2042 2116 XP_022100379.1 uncharacterized protein LOC110984469 isoform X1 [Acanthaster planci] diamond 450 67.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;