RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA576995", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA576995 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12039884 12039884 PRJNA576995_P_NODE_34530_length_251_cov_1.297753_g33938_i0 PRJNA576995 34530 251 1.297753 3.25736003 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 137 4.64e-37   NR PJF19312.1 1246581 g33938 i0 80.5 49.8884462151394 82 16 98 0 1 246 21 102 PJF19312.1 60S ribosomal protein L2 [Paramicrosporidium saccamoebae] diamond 12522 137 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
29637042 29637042 PRJNA576995_P_NODE_41010_length_244_cov_0.900585_g40418_i0 PRJNA576995 41010 244 0.900585 2.1974274 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 115 1.35e-27   NR PJF19231.1 1246581 g40418 i0 66.7 0.995901639344262 81 26 98.4 1 240 1 1166 1246 PJF19231.1 Aminoacyl-tRNA synthetase, class Ia domain-containing protein [Paramicrosporidium saccamoebae] diamond 243 115 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
30346420 30346420 PRJNA576995_P_NODE_40152_length_245_cov_0.895349_g39560_i0 PRJNA576995 40152 245 0.895349 2.19360505 root 1 Root_unresolved Root_unresolved 45.1 0.00381   NR RKP16444.1 988480 g39560 i0 37.7 3.29387755102041 61 27 74.7 1 184 2 74 123 RKP16444.1 hypothetical protein ROZALSC1DRAFT_31622, partial [Rozella allomycis CSF55] diamond 807 45.1 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;