RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA576995", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA576995 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5664095 5664095 PRJNA576995_P_NODE_10965_length_463_cov_2.261538_g10373_i0 PRJNA576995 10965 463 2.261538 10.47092094 Eukaryota 2759 Fungi Fungi 232 3.969999999999999e-74   NR KAJ1508796.1 945690 g10373 i0 70.7 10.6846652267819 150 44 97.2 0 452 3 1 150 KAJ1508796.1 60S ribosomal protein L8 [Coelomomyces lativittatus] diamond 4947 232 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Coelomomycetaceae Coelomomyces Coelomomyces lativittatus
27047998 27047998 PRJNA576995_P_NODE_28262_length_287_cov_1.439252_g27670_i0 PRJNA576995 28262 287 1.439252 4.13065324 Catenaria anguillulae PL171 765915 Fungi Fungi 67 1.6e-10   NR ORZ30312.1 765915 g27670 i0 38.3 1.96515679442509 94 52 98.3 1 285 4 69 156 ORZ30312.1 phosphatase 2C-domain-containing protein [Catenaria anguillulae PL171] diamond 564 67 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;