RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA576995", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA576995 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19687314 19687314 PRJNA576995_P_NODE_38036_length_248_cov_0.880000_g37444_i0 PRJNA576995 38036 248 0.88 2.1824 uncultured Armatimonadetes bacterium 157466 Bacteria Bacteria 172 1.6499999999999999e-38   NTclustered gi|2874253689|emb|OY969415.1| 157466 g37444 i0 82.587 46.3991935483871 201 29 80 6 20 217 3915008 3914811 MAG: uncultured Armatimonadetes bacterium isolate MFD00905.bin.2.19 genome assembly, chromosome: 1 blastn 11507 172 1 Bacteria   Bacillati Armatimonadota         uncultured Armatimonadetes bacterium
32134505 32134505 PRJNA576995_P_NODE_41858_length_243_cov_0.905882_g41266_i0 PRJNA576995 41858 243 0.905882 2.20129326 Armatimonadota bacterium 2033014 Bacteria Bacteria 47 9.98e-4   NR MDW8106072.1 2033014 g41266 i0 36.5 2.8641975308642 74 43 90.1 2 23 241 16 86 MDW8106072.1 class I SAM-dependent methyltransferase [Armatimonadota bacterium] diamond 696 47 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;