contig_metadata
15 rows where bioproject = "PRJNA576995", tax_clade = "Sar" and tax_phylum = "Bacillariophyta"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1136927 | 1136927 | PRJNA576995_P_NODE_13681_length_406_cov_3.042042_g13089_i0 | PRJNA576995 | 13681 | 406 | 3.042042 | 12.35069052 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 92.8 | 1.87e-20 | NR | XP_002293544.1 | 296543 | g13089 | i0 | 57.3 | 6.37684729064039 | 82 | 31 | 57.6 | 1 | 165 | 398 | 69 | 150 | XP_002293544.1 RS8, ribosomal protein 8 [Thalassiosira pseudonana CCMP1335] | diamond | 2589 | 92.8 | 1 | Eukaryota | Sar | Bacillariophyta | Coscinodiscophyceae | Thalassiosirales | Thalassiosiraceae | Thalassiosira | Thalassiosira pseudonana | ||
| 5664229 | 5664229 | PRJNA576995_P_NODE_18085_length_353_cov_1.060714_g17493_i0 | PRJNA576995 | 18085 | 353 | 1.060714 | 3.74432042 | Phaeodactylum tricornutum CCAP 1 | 2850 | SAR_Eukaryotes | SAR_Eukaryotes | 126 | 2.0299999999999993e-34 | NR | XP_002180336.1 | 556484 | g17493 | i0 | 53.5 | 0.858356940509915 | 101 | 47 | 85.8 | 0 | 1 | 303 | 47 | 147 | XP_002180336.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1] | diamond | 303 | 126 | 1 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Naviculales | Phaeodactylaceae | Phaeodactylum | Phaeodactylum tricornutum | ||
| 6938786 | 6938786 | PRJNA576995_P_NODE_25126_length_305_cov_0.853448_g24534_i0 | PRJNA576995 | 25126 | 305 | 0.853448 | 2.6030164 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 156 | 1.03e-46 | NR | VEU44507.1 | 183589 | g24534 | i0 | 72 | 14.7540983606557 | 100 | 28 | 98.4 | 0 | 302 | 3 | 2 | 101 | VEU44507.1 unnamed protein product [Pseudo-nitzschia multistriata] | diamond | 4500 | 157 | 0.993630573248408 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Bacillariales | Bacillariaceae | Pseudo-nitzschia | Pseudo-nitzschia multistriata | ||
| 11340265 | 11340265 | PRJNA576995_P_NODE_42769_length_242_cov_0.869822_g42177_i0 | PRJNA576995 | 42769 | 242 | 0.869822 | 2.10496924 | Cyclotella cryptica | 29204 | SAR_Eukaryotes | SAR_Eukaryotes | 154 | 5.44e-44 | NR | AAX09600.1 | 29204 | g42177 | i0 | 90 | 2.97520661157025 | 80 | 8 | 99.2 | 0 | 240 | 1 | 103 | 182 | AAX09600.1 elongation factor 1 alpha, partial [Cyclotella cryptica] | diamond | 720 | 154 | 1 | Eukaryota | Sar | Bacillariophyta | Coscinodiscophyceae | Stephanodiscales | Stephanodiscaceae | Cyclotella | Cyclotella cryptica | ||
| 26840261 | 26840261 | PRJNA576995_P_NODE_40361_length_245_cov_0.895349_g39769_i0 | PRJNA576995 | 40361 | 245 | 0.895349 | 2.19360505 | Bacillariaceae | 33852 | SAR_Eukaryotes | SAR_Eukaryotes | 45.8 | 0.00318 | NR | CAJ1953877.1 | 2856 | g39769 | i0 | 28.9 | 2.03265306122449 | 83 | 53 | 94.3 | 1 | 5 | 235 | 963 | 1045 | CAJ1953877.1 unnamed protein product [Cylindrotheca closterium] | diamond | 498 | 45.8 | 1 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Bacillariales | Bacillariaceae | Cylindrotheca | Cylindrotheca closterium | ||
| 26984598 | 26984598 | PRJNA576995_P_NODE_34862_length_251_cov_0.865169_g34270_i0 | PRJNA576995 | 34862 | 251 | 0.865169 | 2.17157419 | Nitzschia inconspicua | 303405 | SAR_Eukaryotes | SAR_Eukaryotes | 117 | 1.47e-28 | NR | KAG7338941.1 | 303405 | g34270 | i0 | 67.1 | 0.9800796812749 | 82 | 27 | 98 | 0 | 1 | 246 | 158 | 239 | KAG7338941.1 ATP synthase F1 subcomplex delta subunit [Nitzschia inconspicua] | diamond | 246 | 117 | 1 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Bacillariales | Bacillariaceae | Nitzschia | Nitzschia inconspicua | ||
| 28279529 | 28279529 | PRJNA576995_P_NODE_35066_length_251_cov_0.865169_g34474_i0 | PRJNA576995 | 35066 | 251 | 0.865169 | 2.17157419 | Fragilaria crotonensis | 210448 | SAR_Eukaryotes | SAR_Eukaryotes | 105 | 1.23e-24 | NR | KAI2491713.1 | 210448 | g34474 | i0 | 52.7 | 1.11155378486056 | 93 | 33 | 99.2 | 3 | 1 | 249 | 208 | 299 | KAI2491713.1 methyltransferase domain-containing protein [Fragilaria crotonensis] | diamond | 279 | 105 | 1 | Eukaryota | Sar | Bacillariophyta | Fragilariophyceae | Fragilariales | Fragilariaceae | Fragilaria | Fragilaria crotonensis | ||
| 28798269 | 28798269 | PRJNA576995_P_NODE_43487_length_241_cov_0.916667_g42895_i0 | PRJNA576995 | 43487 | 241 | 0.916667 | 2.20916747 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 66.6 | 1.38e-10 | NR | XP_002180686.1 | 556484 | g42895 | i0 | 44.4 | 13.9917012448133 | 72 | 38 | 89.6 | 2 | 16 | 231 | 165 | 234 | XP_002180686.1 GrpE protein, HSP90 cofactor, chloroplast targeted, partial [Phaeodactylum tricornutum CCAP 1055/1] | diamond | 3372 | 66.6 | 1 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Naviculales | Phaeodactylaceae | Phaeodactylum | Phaeodactylum tricornutum | ||
| 29353364 | 29353364 | PRJNA576995_P_NODE_26549_length_296_cov_1.381166_g25957_i0 | PRJNA576995 | 26549 | 296 | 1.381166 | 4.08825136 | Bacillariaceae sp. | 3061772 | SAR_Eukaryotes | SAR_Eukaryotes | 107 | 1.19e-24 | NR | KAL3923689.1 | 3061772 | g25957 | i0 | 53.4 | 1.71283783783784 | 88 | 41 | 89.2 | 0 | 288 | 25 | 60 | 147 | KAL3923689.1 MAG: hypothetical protein SGILL_001510 [Bacillariaceae sp.] | diamond | 507 | 107 | 1 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Bacillariales | Bacillariaceae | Bacillariaceae sp. | |||
| 29479253 | 29479253 | PRJNA576995_P_NODE_38050_length_248_cov_0.880000_g37458_i0 | PRJNA576995 | 38050 | 248 | 0.88 | 2.1824 | Chaetoceros tenuissimus | 426638 | SAR_Eukaryotes | SAR_Eukaryotes | 57 | 3.78e-7 | NR | GFH52008.1 | 426638 | g37458 | i0 | 42.3 | 3.52016129032258 | 71 | 38 | 85.9 | 1 | 221 | 9 | 843 | 910 | GFH52008.1 peptidase M16-domain-containing protein [Chaetoceros tenuissimus] | diamond | 873 | 57 | 1 | Eukaryota | Sar | Bacillariophyta | Coscinodiscophyceae | Chaetocerotales | Chaetocerotaceae | Chaetoceros | Chaetoceros tenuissimus | ||
| 29542558 | 29542558 | PRJNA576995_P_NODE_20970_length_330_cov_1.797665_g20378_i0 | PRJNA576995 | 20970 | 330 | 1.797665 | 5.9322945 | Skeletonema marinoi | 267567 | SAR_Eukaryotes | SAR_Eukaryotes | 52.4 | 4.22e-5 | NR | KAK1735154.1 | 267567 | g20378 | i0 | 44.6 | 0.509090909090909 | 56 | 30 | 50 | 1 | 37 | 201 | 500 | 555 | KAK1735154.1 hypothetical protein QTG54_014220 [Skeletonema marinoi] | diamond | 168 | 52.4 | 1 | Eukaryota | Sar | Bacillariophyta | Coscinodiscophyceae | Thalassiosirales | Skeletonemataceae | Skeletonema | Skeletonema marinoi | ||
| 31849553 | 31849553 | PRJNA576995_P_NODE_37777_length_248_cov_0.880000_g37185_i0 | PRJNA576995 | 37777 | 248 | 0.88 | 2.1824 | Skeletonema marinoi | 267567 | SAR_Eukaryotes | SAR_Eukaryotes | 51.6 | 2.78e-5 | NR | KAK1747590.1 | 267567 | g37185 | i0 | 36.6 | 1.56048387096774 | 82 | 39 | 84.7 | 2 | 31 | 240 | 40 | 120 | KAK1747590.1 phytanoyl-CoA dioxygenase family protein [Skeletonema marinoi] | diamond | 387 | 51.6 | 1 | Eukaryota | Sar | Bacillariophyta | Coscinodiscophyceae | Thalassiosirales | Skeletonemataceae | Skeletonema | Skeletonema marinoi | ||
| 31862978 | 31862978 | PRJNA576995_P_NODE_35177_length_251_cov_0.865169_g34585_i0 | PRJNA576995 | 35177 | 251 | 0.865169 | 2.17157419 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 47.4 | 9.55e-4 | NR | KAK1736995.1 | 267567 | g34585 | i0 | 43.4 | 3.03585657370518 | 53 | 29 | 62.2 | 1 | 94 | 249 | 159 | 211 | KAK1736995.1 calcium-dependent protein kinase [Skeletonema marinoi] | diamond | 762 | 47.4 | 1 | Eukaryota | Sar | Bacillariophyta | Coscinodiscophyceae | Thalassiosirales | Skeletonemataceae | Skeletonema | Skeletonema marinoi | ||
| 32166197 | 32166197 | PRJNA576995_P_NODE_1118_length_1419_cov_2.208024_g911_i0 | PRJNA576995 | 1118 | 1419 | 2.208024 | 31.33186056 | Seminavis robusta | 568900 | SAR_Eukaryotes | SAR_Eukaryotes | 148 | 2.14e-35 | NR | CAB9518259.1 | 568900 | g911 | i0 | 40.8 | 0.492600422832981 | 233 | 127 | 49 | 5 | 216 | 911 | 33 | 255 | CAB9518259.1 protocatechuate 3,4-dioxygenase [Seminavis robusta] | diamond | 699 | 148 | 1 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Naviculales | Naviculaceae | Seminavis | Seminavis robusta | ||
| 32292952 | 32292952 | PRJNA576995_P_NODE_13119_length_416_cov_1.775510_g12527_i0 | PRJNA576995 | 13119 | 416 | 1.77551 | 7.3861216 | Bacillariaceae sp. | 3061772 | SAR_Eukaryotes | SAR_Eukaryotes | 44.7 | 0.0293 | NR | KAL3902955.1 | 3061772 | g12527 | i0 | 36.4 | 0.396634615384615 | 55 | 35 | 39.7 | 0 | 343 | 179 | 94 | 148 | KAL3902955.1 MAG: hypothetical protein SGILL_010631, partial [Bacillariaceae sp.] | diamond | 165 | 44.7 | 1 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Bacillariales | Bacillariaceae | Bacillariaceae sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;