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contig_metadata

8 rows where bioproject = "PRJNA576995", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA576995 · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1836257 1836257 PRJNA576995_P_NODE_37602_length_248_cov_0.880000_g37010_i0 PRJNA576995 37602 248 0.88 2.1824 Eimeria maxima 5804 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|915142399|ref|XM_013482306.1| 5804 g37010 i0 94.444 0.145161290322581 36 1 15 1 95 130 1801 1767 Eimeria maxima hypothetical protein, conserved partial mRNA blastn 36 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
6938624 6938624 PRJNA576995_P_NODE_16426_length_370_cov_1.555556_g15834_i0 PRJNA576995 16426 370 1.555556 5.7555572 Eimeria mitis 44415 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.035   NTclustered gi|1939226430|ref|XM_038022300.1| 44415 g15834 i0 100 0.0756756756756757 28 0 8 0 294 321 542 569 Eimeria mitis uncharacterized protein (EMH_0038170), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
15165143 15165143 PRJNA576995_P_NODE_9592_length_503_cov_1.025581_g9002_i0 PRJNA576995 9592 503 1.025581 5.15867243 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.004   NTclustered gi|916416145|ref|XM_013373850.1| 5802 g9002 i0 100 10.8230616302187 30 0 6 0 218 247 176 147 Eimeria tenella uncharacterized protein (ETH_00043680), partial mRNA blastn 5444 56.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
20963019 20963019 PRJNA576995_P_NODE_38957_length_246_cov_1.780347_g38365_i0 PRJNA576995 38957 246 1.780347 4.37965362 Plasmodium chabaudi 5825 SAR_Eukaryotes SAR_Eukaryotes 206 1.61e-48   NTclustered gi|1027956776|ref|XM_016798718.1| 31271 g38365 i0 83.945 54.3943089430894 218 32 88 3 2 218 10 225 Plasmodium chabaudi chabaudi ubiquitin-60S ribosomal protein L40, putative (PCHAS_1141200), partial mRNA blastn 13381 206 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium chabaudi
21538916 21538916 PRJNA576995_P_NODE_28917_length_284_cov_1.094787_g28325_i0 PRJNA576995 28917 284 1.094787 3.10919508 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 58.4 5.64e-4   NTclustered gi|915005919|ref|XM_013394426.1| 5801 g28325 i0 97.059 1.38028169014085 34 1 12 0 31 64 844 811 Eimeria acervulina SWIM zinc finger domain-containing protein, putative partial mRNA blastn 392 58.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
30472390 30472390 PRJNA576995_P_NODE_39653_length_246_cov_0.890173_g39061_i0 PRJNA576995 39653 246 0.890173 2.18982558 Eucoccidiorida 75739 SAR_Eukaryotes SAR_Eukaryotes 64.3 7.39e-11   NR OEH75044.1 88456 g39061 i0 60.3 4.30487804878049 63 23 74.4 1 245 63 70 132 OEH75044.1 40s ribosomal protein [Cyclospora cayetanensis] diamond 1059 64.3 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
31438333 31438333 PRJNA576995_P_NODE_30036_length_278_cov_1.126829_g29444_i0 PRJNA576995 30036 278 1.126829 3.13258462 Plasmodium falciparum Dd2 57267 SAR_Eukaryotes SAR_Eukaryotes 108 5.8e-27   NR KOB85687.1 57267 g29444 i0 51.6 5.89208633093525 91 44 98.2 0 5 277 50 140 KOB85687.1 hypothetical protein PFDG_01164 [Plasmodium falciparum Dd2] diamond 1638 108 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
32811181 32811181 PRJNA576995_P_NODE_40020_length_245_cov_0.895349_g39428_i0 PRJNA576995 40020 245 0.895349 2.19360505 Eimeria 5800 SAR_Eukaryotes SAR_Eukaryotes 53.1 8.39e-6   NR XP_013249611.1 5801 g39428 i0 35.8 2.46122448979592 67 43 82 0 214 14 1462 1528 XP_013249611.1 DNA polymerase, related [Eimeria acervulina] diamond 603 53.5 0.992523364485981 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;