contig_metadata
25 rows where bioproject = "PRJNA576995" and tax_clade = "PVC group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2412384 | 2412384 | PRJNA576995_P_NODE_31142_length_272_cov_1.226131_g30550_i0 | PRJNA576995 | 31142 | 272 | 1.226131 | 3.33507632 | Engelhardtia | 139931 | Bacteria | Bacteria | 52.8 | 0.025 | NTclustered | gi|1712638177|gb|CP036287.1| | 2528011 | g30550 | i0 | 100 | 0.205882352941176 | 28 | 0 | 10 | 0 | 36 | 63 | 4944568 | 4944541 | Planctomycetes bacterium Pla133 chromosome, complete genome | blastn | 56 | 52.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Engelhardtia | Engelhardtia mirabilis | |||
| 3111263 | 3111263 | PRJNA576995_P_NODE_10283_length_481_cov_4.529412_g9691_i0 | PRJNA576995 | 10283 | 481 | 4.529412 | 21.78647172 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 52.8 | 0.047 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g9691 | i0 | 100 | 0.0582120582120582 | 28 | 0 | 6 | 0 | 39 | 66 | 4483466 | 4483493 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 28 | 52.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 6240545 | 6240545 | PRJNA576995_P_NODE_29665_length_280_cov_1.241546_g29073_i0 | PRJNA576995 | 29665 | 280 | 1.241546 | 3.4763288 | Rohdeia | 3405237 | Bacteria | Bacteria | 172 | 1.8999999999999995e-38 | NTclustered | gi|2874254106|emb|OY970189.1| | 100233 | g29073 | i0 | 79.07 | 60.8392857142857 | 258 | 49 | 91 | 5 | 1 | 255 | 1654470 | 1654215 | MAG: uncultured Planctomycetaceae bacterium isolate MFD09603.bin.2.127 genome assembly, chromosome: 1 | blastn | 17035 | 172 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | uncultured Planctomycetaceae bacterium | ||
| 9489250 | 9489250 | PRJNA576995_P_NODE_42548_length_242_cov_0.911243_g41956_i0 | PRJNA576995 | 42548 | 242 | 0.911243 | 2.20520806 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 270 | 5.53e-68 | NTclustered | gi|1850852299|gb|CP053450.1| | 2026780 | g41956 | i0 | 87.342 | 104 | 237 | 28 | 97 | 2 | 1 | 235 | 719719 | 719955 | MAG: Planctomycetota bacterium isolate PNC22 chromosome | blastn | 25168 | 270 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 9489265 | 9489265 | PRJNA576995_P_NODE_43568_length_236_cov_2.742331_g42976_i0 | PRJNA576995 | 43568 | 236 | 2.742331 | 6.47190116 | Bacteria | 2 | Bacteria | Bacteria | 125 | 3.7e-31 | NR | MEW6156070.1 | 2026799 | g42976 | i0 | 73.1 | 4.95762711864407 | 78 | 21 | 99.2 | 0 | 236 | 3 | 892 | 969 | MEW6156070.1 LamG domain-containing protein [Verrucomicrobiota bacterium] | diamond | 1170 | 126 | 0.992063492063492 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 18412722 | 18412722 | PRJNA576995_P_NODE_33175_length_260_cov_1.278075_g32583_i0 | PRJNA576995 | 33175 | 260 | 1.278075 | 3.322995 | Lacunisphaera limnophila | 1838286 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|1070531674|gb|CP016094.1| | 1838286 | g32583 | i0 | 97.059 | 0.130769230769231 | 34 | 0 | 13 | 1 | 193 | 226 | 760791 | 760823 | Lacunisphaera limnophila strain IG16b, complete genome | blastn | 34 | 56.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Lacunisphaera | Lacunisphaera limnophila | |
| 22237759 | 22237759 | PRJNA576995_P_NODE_27878_length_289_cov_1.351852_g27286_i0 | PRJNA576995 | 27878 | 289 | 1.351852 | 3.90685228 | Phycisphaerae bacterium | 2026778 | Bacteria | Bacteria | 144 | 4.4e-39 | NR | MBC7782499.1 | 2026778 | g27286 | i0 | 74 | 1.99307958477509 | 96 | 25 | 99.7 | 0 | 1 | 288 | 227 | 322 | MBC7782499.1 glycosyltransferase family 4 protein [Phycisphaerae bacterium] | diamond | 576 | 144 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerae bacterium | ||||
| 23513155 | 23513155 | PRJNA576995_P_NODE_34799_length_251_cov_0.865169_g34207_i0 | PRJNA576995 | 34799 | 251 | 0.865169 | 2.17157419 | Tepidisphaeraceae bacterium | 2876886 | Bacteria | Bacteria | 337 | 5.609999999999998e-88 | NTclustered | gi|2874253799|emb|OY969783.1| | 2876886 | g34207 | i0 | 91.27 | 7.0398406374502 | 252 | 15 | 99 | 6 | 1 | 249 | 2503098 | 2502851 | MAG: Tepidisphaeraceae bacterium isolate MFD04580.bin.c.1 genome assembly, chromosome: 1 | blastn | 1767 | 337 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Tepidisphaeraceae bacterium | ||
| 27616797 | 27616797 | PRJNA576995_P_NODE_42424_length_242_cov_0.911243_g41832_i0 | PRJNA576995 | 42424 | 242 | 0.911243 | 2.20520806 | Phycisphaerae bacterium | 2026778 | Bacteria | Bacteria | 48.1 | 4.57e-4 | NR | MBC8105615.1 | 2026778 | g41832 | i0 | 42.3 | 0.880165289256198 | 71 | 40 | 86.8 | 1 | 226 | 17 | 197 | 267 | MBC8105615.1 hypothetical protein [Phycisphaerae bacterium] | diamond | 213 | 48.1 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerae bacterium | ||||
| 28027244 | 28027244 | PRJNA576995_P_NODE_38845_length_247_cov_0.885057_g38253_i0 | PRJNA576995 | 38845 | 247 | 0.885057 | 2.18609079 | Planctomycetaceae bacterium | 2026779 | Bacteria | Bacteria | 141 | 6.8399999999999995e-37 | NR | MDX1970569.1 | 2026779 | g38253 | i0 | 81.7 | 0.995951417004049 | 82 | 15 | 99.6 | 0 | 1 | 246 | 322 | 403 | MDX1970569.1 PQQ-binding-like beta-propeller repeat protein [Planctomycetaceae bacterium] | diamond | 246 | 141 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 28451326 | 28451326 | PRJNA576995_P_NODE_5826_length_668_cov_0.983193_g5254_i0 | PRJNA576995 | 5826 | 668 | 0.983193 | 6.56772924 | Bacteria | 2 | Bacteria | Bacteria | 101 | 1.28e-20 | NR | MCE2811946.1 | 2026779 | g5254 | i0 | 37.7 | 3.23802395209581 | 175 | 99 | 74.1 | 4 | 552 | 58 | 163 | 337 | MCE2811946.1 hypothetical protein [Planctomycetaceae bacterium] | diamond | 2163 | 102 | 0.990196078431373 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 29384930 | 29384930 | PRJNA576995_P_NODE_30649_length_275_cov_0.881188_g30057_i0 | PRJNA576995 | 30649 | 275 | 0.881188 | 2.423267 | Phycisphaerae bacterium | 2026778 | Bacteria | Bacteria | 43.1 | 0.0387 | NR | HUO07241.1 | 2026778 | g30057 | i0 | 52.5 | 0.436363636363636 | 40 | 17 | 43.6 | 2 | 251 | 132 | 297 | 334 | HUO07241.1 radical SAM family heme chaperone HemW [Phycisphaerae bacterium] | diamond | 120 | 43.1 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerae bacterium | ||||
| 30047809 | 30047809 | PRJNA576995_P_NODE_42191_length_242_cov_0.911243_g41599_i0 | PRJNA576995 | 42191 | 242 | 0.911243 | 2.20520806 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 56.6 | 4.32e-7 | NR | MBS0187422.1 | 2026780 | g41599 | i0 | 48.1 | 1.00413223140496 | 81 | 36 | 95.5 | 3 | 238 | 8 | 41 | 119 | MBS0187422.1 choice-of-anchor A family protein [Planctomycetota bacterium] | diamond | 243 | 56.6 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 30174331 | 30174331 | PRJNA576995_P_NODE_41072_length_244_cov_0.900585_g40480_i0 | PRJNA576995 | 41072 | 244 | 0.900585 | 2.1974274 | Thermoguttaceae bacterium | 2691551 | Bacteria | Bacteria | 42.7 | 0.0204 | NR | MEN6367618.1 | 2691551 | g40480 | i0 | 34 | 0.614754098360656 | 50 | 29 | 56.6 | 1 | 16 | 153 | 100 | 149 | MEN6367618.1 hypothetical protein [Thermoguttaceae bacterium] | diamond | 150 | 42.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Thermoguttaceae | Thermoguttaceae bacterium | ||
| 30314816 | 30314816 | PRJNA576995_P_NODE_40372_length_245_cov_0.895349_g39780_i0 | PRJNA576995 | 40372 | 245 | 0.895349 | 2.19360505 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 74.3 | 1.51e-14 | NR | MBL9159718.1 | 2026801 | g39780 | i0 | 50 | 3.28163265306122 | 70 | 35 | 85.7 | 0 | 240 | 31 | 68 | 137 | MBL9159718.1 hypothetical protein [Verrucomicrobiales bacterium] | diamond | 804 | 74.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 30490389 | 30490389 | PRJNA576995_P_NODE_35153_length_251_cov_0.865169_g34561_i0 | PRJNA576995 | 35153 | 251 | 0.865169 | 2.17157419 | Phycisphaerae bacterium | 2026778 | Bacteria | Bacteria | 43.9 | 0.016 | NR | MBP7747433.1 | 2026778 | g34561 | i0 | 39.2 | 0.609561752988048 | 51 | 31 | 61 | 0 | 205 | 53 | 154 | 204 | MBP7747433.1 hypothetical protein [Phycisphaerae bacterium] | diamond | 153 | 43.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerae bacterium | ||||
| 30616579 | 30616579 | PRJNA576995_P_NODE_19033_length_345_cov_1.029412_g18441_i0 | PRJNA576995 | 19033 | 345 | 1.029412 | 3.5514714 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 47.8 | 0.00178 | NR | MBS0658504.1 | 2026799 | g18441 | i0 | 57.9 | 0.330434782608696 | 38 | 13 | 30.4 | 2 | 265 | 161 | 6 | 43 | MBS0658504.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 114 | 47.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 30616587 | 30616587 | PRJNA576995_P_NODE_24113_length_311_cov_0.970588_g23521_i0 | PRJNA576995 | 24113 | 311 | 0.970588 | 3.01852868 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 65.5 | 7.28e-10 | NR | MEK7411798.1 | 2026780 | g23521 | i0 | 50.9 | 0.530546623794212 | 55 | 27 | 53.1 | 0 | 300 | 136 | 302 | 356 | MEK7411798.1 hypothetical protein [Planctomycetota bacterium] | diamond | 165 | 65.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 30932728 | 30932728 | PRJNA576995_P_NODE_34034_length_254_cov_2.066298_g33442_i0 | PRJNA576995 | 34034 | 254 | 2.066298 | 5.24839692 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 74.3 | 3.140000000000001e-13 | NR | MBX3364978.1 | 2026777 | g33442 | i0 | 51.3 | 2.82283464566929 | 78 | 23 | 92.1 | 2 | 16 | 249 | 312 | 374 | MBX3364978.1 FAD-dependent oxidoreductase [Phycisphaeraceae bacterium] | diamond | 717 | 74.3 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 31059354 | 31059354 | PRJNA576995_P_NODE_23235_length_316_cov_1.218107_g22643_i0 | PRJNA576995 | 23235 | 316 | 1.218107 | 3.84921812 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 43.5 | 0.0478 | NR | MBS0619893.1 | 2026799 | g22643 | i0 | 28.9 | 0.920886075949367 | 97 | 57 | 92.1 | 3 | 295 | 5 | 464 | 548 | MBS0619893.1 aconitate hydratase [Verrucomicrobiota bacterium] | diamond | 291 | 43.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 31248610 | 31248610 | PRJNA576995_P_NODE_32575_length_264_cov_1.104712_g31983_i0 | PRJNA576995 | 32575 | 264 | 1.104712 | 2.91643968 | Chlamydiota bacterium | 2081524 | Bacteria | Bacteria | 57.4 | 2.84e-7 | NR | NGX54963.1 | 2081524 | g31983 | i0 | 49 | 0.579545454545455 | 51 | 26 | 58 | 0 | 111 | 263 | 16 | 66 | NGX54963.1 hypothetical protein [Chlamydiota bacterium] | diamond | 153 | 57.4 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiota bacterium | |||||
| 31438334 | 31438334 | PRJNA576995_P_NODE_3056_length_928_cov_1.540351_g2616_i0 | PRJNA576995 | 3056 | 928 | 1.540351 | 14.29445728 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 55.1 | 9.18e-5 | NR | MDD8043828.1 | 2026799 | g2616 | i0 | 39.2 | 0.239224137931034 | 74 | 41 | 22.6 | 1 | 909 | 700 | 168 | 241 | MDD8043828.1 glutamine amidotransferase [Verrucomicrobiota bacterium] | diamond | 222 | 55.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 31976086 | 31976086 | PRJNA576995_P_NODE_28098_length_288_cov_1.372093_g27506_i0 | PRJNA576995 | 28098 | 288 | 1.372093 | 3.95162784 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 114 | 4.7e-27 | NR | HMN42288.1 | 2052180 | g27506 | i0 | 60.2 | 0.96875 | 93 | 36 | 95.8 | 1 | 7 | 282 | 1361 | 1453 | HMN42288.1 GC-type dockerin domain-anchored protein [Phycisphaerales bacterium] | diamond | 279 | 114 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 32514370 | 32514370 | PRJNA576995_P_NODE_39759_length_246_cov_0.872832_g39167_i0 | PRJNA576995 | 39759 | 246 | 0.872832 | 2.14716672 | Planctomycetia bacterium | 2052181 | Bacteria | Bacteria | 45.1 | 0.00579 | NR | MBL8799175.1 | 2052181 | g39167 | i0 | 32.4 | 1.60975609756098 | 71 | 42 | 79.3 | 1 | 206 | 12 | 340 | 410 | MBL8799175.1 adenylate/guanylate cyclase domain-containing protein [Planctomycetia bacterium] | diamond | 396 | 45.1 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetia bacterium | ||||
| 32653457 | 32653457 | PRJNA576995_P_NODE_26460_length_297_cov_1.031250_g25868_i0 | PRJNA576995 | 26460 | 297 | 1.03125 | 3.0628125 | Planctomycetia | 203683 | Bacteria | Bacteria | 48.1 | 2.38e-4 | NR | MEZ6142109.1 | 1914240 | g25868 | i0 | 58.1 | 3.64646464646465 | 31 | 13 | 31.3 | 0 | 94 | 2 | 2 | 32 | MEZ6142109.1 TspO/MBR family protein [Zavarzinella sp.] | diamond | 1083 | 48.1 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Zavarzinella | Zavarzinella sp. |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;