RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA576995", tax_clade = "Metamonada" and tax_phylum = "Preaxostyla"

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tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 2 ✖

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA576995 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28406071 28406071 PRJNA576995_P_NODE_29866_length_279_cov_1.121359_g29274_i0 PRJNA576995 29866 279 1.121359 3.12859161 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 43.9 0.0235   NR KAJ4454719.1 342808 g29274 i0 44.7 0.408602150537634 38 21 40.9 0 262 149 6801 6838 KAJ4454719.1 putative low-density lipoprotein receptor-related protein [Paratrimastix pyriformis] diamond 114 43.9 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
31705019 31705019 PRJNA576995_P_NODE_26397_length_297_cov_1.375000_g25805_i0 PRJNA576995 26397 297 1.375 4.08375 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 109 1.17e-27   NR KAJ4455598.1 342808 g25805 i0 55.7 11.1111111111111 88 39 88.9 0 19 282 14 101 KAJ4455598.1 putative 40S ribosomal protein S19-1 [Paratrimastix pyriformis] diamond 3300 110 0.990909090909091 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;