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contig_metadata

26 rows where bioproject = "PRJNA576995", tax_clade = "Amoebozoa" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 26 ✖

tax_clade 1

  • Amoebozoa · 26 ✖

bioproject 1

  • PRJNA576995 · 26 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3111732 3111732 PRJNA576995_P_NODE_39323_length_246_cov_0.890173_g38731_i0 PRJNA576995 39323 246 0.890173 2.18982558 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 383 6.94e-102   NTclustered gi|470418397|ref|XM_004337037.1| 1257118 g38731 i0 96.537 0.939024390243902 231 8 94 0 1 231 496 726 Acanthamoeba castellanii str. Neff inorganic diphosphatase (ACA1_215010), partial mRNA blastn 231 383 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
4388252 4388252 PRJNA576995_P_NODE_32364_length_265_cov_1.291667_g31772_i0 PRJNA576995 32364 265 1.291667 3.42291755 uncultured Vannellidae 544561 Discosea other_Eukaryota 189 1.7699999999999996e-43   NTclustered gi|724028220|gb|KP099879.1| 544561 g31772 i0 80.15 87.2905660377358 267 42 99 9 1 263 554 813 Uncultured Vannellidae clone b29 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 23132 189 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae   uncultured Vannellidae
4388292 4388292 PRJNA576995_P_NODE_34884_length_251_cov_0.865169_g34292_i0 PRJNA576995 34884 251 0.865169 2.17157419 Vannella sp. ACN1 1215628 Discosea other_Eukaryota 436 5.369999999999999e-118   NTclustered gi|399764213|gb|JQ271724.1| 1215628 g34292 i0 98.008 95.3426294820717 251 5 100 0 1 251 733 983 Vannella sp. ACN1 18S ribosomal RNA gene, partial sequence blastn 23931 436 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. ACN1
5664392 5664392 PRJNA576995_P_NODE_27945_length_289_cov_1.069444_g27353_i0 PRJNA576995 27945 289 1.069444 3.09069316 Platyamoeba placida 3454475 Discosea other_Eukaryota 374 5.029999999999998e-99   NTclustered gi|33946348|gb|AY294153.1| 197527 g27353 i0 89.965 98.4636678200692 289 29 100 0 1 289 1127 839 Platyamoeba placida actin mRNA, partial cds blastn 28456 374 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
6938886 6938886 PRJNA576995_P_NODE_31926_length_268_cov_1.087179_g31334_i0 PRJNA576995 31926 268 1.087179 2.91363972 Cochliopodium spiniferum 313558 Discosea other_Eukaryota 257 4.84e-64   NTclustered gi|330902897|gb|JF298273.1| 313558 g31334 i0 83.955 95.0373134328358 268 43 100 0 1 268 370 103 Cochliopodium spiniferum clone 5102 actin gene, partial cds blastn 25470 257 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium spiniferum
14589301 14589301 PRJNA576995_P_NODE_13712_length_406_cov_1.246246_g13120_i0 PRJNA576995 13712 406 1.246246 5.05975876 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 181 3.82e-50   NR XP_004337378.1 1257118 g13120 i0 62.2 1.05665024630542 143 45 99 1 405 4 287 429 XP_004337378.1 Major Vault Protein repeatcontaining protein [Acanthamoeba castellanii str. Neff] diamond 429 181 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22237564 22237564 PRJNA576995_P_NODE_17118_length_362_cov_1.910035_g16526_i0 PRJNA576995 17118 362 1.910035 6.9143267 Platyamoeba placida 3454475 Discosea other_Eukaryota 466 1.03e-126   NTclustered gi|33946348|gb|AY294153.1| 197527 g16526 i0 90.196 100.127071823204 357 35 99 0 6 362 556 912 Platyamoeba placida actin mRNA, partial cds blastn 36246 466 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
22237939 22237939 PRJNA576995_P_NODE_41758_length_243_cov_0.905882_g41166_i0 PRJNA576995 41758 243 0.905882 2.20129326 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 143 1.2599999999999998e-29   NTclustered gi|470373752|ref|XM_004332996.1| 1257118 g41166 i0 77.551 2.09876543209877 245 49 99 6 1 242 627 386 Acanthamoeba castellanii str. Neff ribosomal protein S5, putative (ACA1_048210), partial mRNA blastn 510 143 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26731023 26731023 PRJNA576995_P_NODE_37461_length_248_cov_0.880000_g36869_i0 PRJNA576995 37461 248 0.88 2.1824 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 95.9 1.05e-21   NR XP_004336646.1 1257118 g36869 i0 54.9 0.858870967741935 71 31 84.7 1 1 210 206 276 XP_004336646.1 Phytanoyl-CoA dioxygenase [Acanthamoeba castellanii str. Neff] diamond 213 95.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27016215 27016215 PRJNA576995_P_NODE_35442_length_250_cov_1.542373_g34850_i0 PRJNA576995 35442 250 1.542373 3.8559325 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 127 2.05e-32   NR XP_004348339.1 1257118 g34850 i0 75.3 1.944 81 20 97.2 0 7 249 17 97 XP_004348339.1 H(+)-transporting atpase family protein [Acanthamoeba castellanii str. Neff] diamond 486 127 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27300926 27300926 PRJNA576995_P_NODE_37783_length_248_cov_0.880000_g37191_i0 PRJNA576995 37783 248 0.88 2.1824 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 65.5 3.94e-10   NR XP_004368098.1 1257118 g37191 i0 39 0.991935483870968 82 50 99.2 0 2 247 227 308 XP_004368098.1 Ubiquitin carboxylterminal hydrolase 15, putative [Acanthamoeba castellanii str. Neff] diamond 246 65.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27521867 27521867 PRJNA576995_P_NODE_37443_length_248_cov_0.880000_g36851_i0 PRJNA576995 37443 248 0.88 2.1824 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 109 4.08e-27   NR XP_004341414.1 1257118 g36851 i0 66.3 0.967741935483871 80 27 96.8 0 8 247 81 160 XP_004341414.1 Factin-capping protein subunit alpha-2, putative [Acanthamoeba castellanii str. Neff] diamond 240 109 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27743258 27743258 PRJNA576995_P_NODE_36764_length_249_cov_0.875000_g36172_i0 PRJNA576995 36764 249 0.875 2.17875 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 75.1 1.34e-13   NR XP_004335318.1 1257118 g36172 i0 45.9 0.891566265060241 74 39 88 1 248 30 2 75 XP_004335318.1 coronin, putative [Acanthamoeba castellanii str. Neff] diamond 222 75.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27932415 27932415 PRJNA576995_P_NODE_26725_length_295_cov_1.387387_g26133_i0 PRJNA576995 26725 295 1.387387 4.09279165 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 134 2.889999999999999e-38   NR 7SOG_A 5755 g26133 i0 59.8 1.99322033898305 97 39 98.6 0 291 1 3 99 7SOG_A Chain A, Actophorin [Acanthamoeba castellanii] diamond 588 134 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28121878 28121878 PRJNA576995_P_NODE_42065_length_242_cov_1.573964_g41473_i0 PRJNA576995 42065 242 1.573964 3.80899288 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 72.8 7.89e-13   NR XP_004335637.1 1257118 g41473 i0 46.7 0.929752066115702 75 40 93 0 15 239 217 291 XP_004335637.1 hydrolase, alpha/beta fold domain containing protein [Acanthamoeba castellanii str. Neff] diamond 225 72.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29132383 29132383 PRJNA576995_P_NODE_39629_length_246_cov_0.890173_g39037_i0 PRJNA576995 39629 246 0.890173 2.18982558 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 86.7 3.31e-18   NR XP_004338074.1 1257118 g39037 i0 69.3 0.914634146341463 75 23 91.5 0 6 230 160 234 XP_004338074.1 TolAlike protein [Acanthamoeba castellanii str. Neff] diamond 225 86.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29195521 29195521 PRJNA576995_P_NODE_39389_length_246_cov_0.890173_g38797_i0 PRJNA576995 39389 246 0.890173 2.18982558 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 56.2 3.98e-7   NR XP_004349741.1 1257118 g38797 i0 48.3 0.731707317073171 60 29 73.2 1 66 245 33 90 XP_004349741.1 uncharacterized protein ACA1_034610 [Acanthamoeba castellanii str. Neff] diamond 180 56.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29479255 29479255 PRJNA576995_P_NODE_39290_length_246_cov_0.890173_g38698_i0 PRJNA576995 39290 246 0.890173 2.18982558 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 60.1 2.97e-8   NR XP_004336944.1 1257118 g38698 i0 58.2 1.54878048780488 55 22 67.1 1 77 241 566 619 XP_004336944.1 RasGEF domain containing protein [Acanthamoeba castellanii str. Neff] diamond 381 60.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29795100 29795100 PRJNA576995_P_NODE_29011_length_283_cov_1.466667_g28419_i0 PRJNA576995 29011 283 1.466667 4.15066761 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 62.8 5.31e-9   NR XP_004334773.1 1257118 g28419 i0 44.7 0.80565371024735 76 39 80.6 2 229 2 386 458 XP_004334773.1 Poly(ADPribose) polymerase [Acanthamoeba castellanii str. Neff] diamond 228 62.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31438324 31438324 PRJNA576995_P_NODE_22536_length_320_cov_1.246964_g21944_i0 PRJNA576995 22536 320 1.246964 3.9902848 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 43.5 0.0314   NR XP_004341616.1 1257118 g21944 i0 38.5 0.73125 78 37 72.2 3 69 299 107 174 XP_004341616.1 EF hand domain containing protein [Acanthamoeba castellanii str. Neff] diamond 234 43.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31596834 31596834 PRJNA576995_P_NODE_35336_length_251_cov_0.865169_g34744_i0 PRJNA576995 35336 251 0.865169 2.17157419 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 46.2 3.45e-4   NR XP_004333525.1 1257118 g34744 i0 71.4 0.418326693227092 35 9 41.8 1 7 111 12 45 XP_004333525.1 Actobindin, putative [Acanthamoeba castellanii str. Neff] diamond 105 46.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31659688 31659688 PRJNA576995_P_NODE_41017_length_244_cov_0.900585_g40425_i0 PRJNA576995 41017 244 0.900585 2.1974274 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 94 1.65e-22   NR XP_004348720.1 1257118 g40425 i0 52.5 0.983606557377049 80 38 98.4 0 1 240 34 113 XP_004348720.1 actin binding protein [Acanthamoeba castellanii str. Neff] diamond 240 94 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31881096 31881096 PRJNA576995_P_NODE_33297_length_259_cov_1.655914_g32705_i0 PRJNA576995 33297 259 1.655914 4.28881726 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 84 1.11e-17   NR XP_004337597.1 1257118 g32705 i0 61.5 0.752895752895753 65 22 75.3 2 196 2 21 82 XP_004337597.1 uncharacterized protein ACA1_164640 [Acanthamoeba castellanii str. Neff] diamond 195 84 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32166230 32166230 PRJNA576995_P_NODE_41898_length_243_cov_0.905882_g41306_i0 PRJNA576995 41898 243 0.905882 2.20129326 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 48.9 2.37e-4   NR XP_004342062.1 1257118 g41306 i0 34.9 2.07407407407407 86 37 84 2 3 206 314 398 XP_004342062.1 KH domain containing protein [Acanthamoeba castellanii str. Neff] diamond 504 48.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32419249 32419249 PRJNA576995_P_NODE_39439_length_246_cov_0.890173_g38847_i0 PRJNA576995 39439 246 0.890173 2.18982558 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 70.9 2.58e-13   NR XP_004367517.1 1257118 g38847 i0 43.4 1.01219512195122 83 44 97.6 1 241 2 5 87 XP_004367517.1 EF hand domain containing protein [Acanthamoeba castellanii str. Neff] diamond 249 70.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32829288 32829288 PRJNA576995_P_NODE_40800_length_244_cov_0.900585_g40208_i0 PRJNA576995 40800 244 0.900585 2.1974274 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 55.5 5.87e-7   NR XP_004339255.1 1257118 g40208 i0 33.8 2.77868852459016 74 47 89.8 2 3 221 121 193 XP_004339255.1 saposin B domain containing protein [Acanthamoeba castellanii str. Neff] diamond 678 55.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;