contig_metadata
4 rows where bioproject = "PRJNA575566" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17137591 | 17137591 | PRJNA575566_P_NODE_134_length_2186_cov_4.372235_g104_i0 | PRJNA575566 | 134 | 2186 | 4.372235 | 95.5770571 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 143 | 1.3e-28 | NTclustered | gi|2649718696|emb|OZ001226.1| | 2202144 | g104 | i0 | 81.461 | 7.10475754803294 | 178 | 30 | 8 | 3 | 1345 | 1520 | 74373 | 74549 | MAG: Spirochaetota bacterium isolate 8b34eeeb-0c33-43c6-8155-d1d64b2f6b4c genome assembly, chromosome: 19 | blastn | 15531 | 143 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 26763012 | 26763012 | PRJNA575566_P_NODE_22821_length_216_cov_2.058065_g22624_i0 | PRJNA575566 | 22821 | 216 | 2.058065 | 4.4454204 | Spirochaetae bacterium HGW-Spirochaetae-1 | 2013832 | Bacteria | Bacteria | 62 | 4.09e-9 | NR | PKL37824.1 | 2013832 | g22624 | i0 | 45.7 | 0.972222222222222 | 70 | 36 | 97.2 | 1 | 3 | 212 | 417 | 484 | PKL37824.1 MAG: F0F1 ATP synthase subunit alpha [Spirochaetae bacterium HGW-Spirochaetae-1] | diamond | 210 | 62 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetae bacterium HGW-Spirochaetae-1 | ||||||
| 28009264 | 28009264 | PRJNA575566_P_NODE_19505_length_238_cov_1.084746_g19308_i0 | PRJNA575566 | 19505 | 238 | 1.084746 | 2.58169548 | root | 1 | Root_unresolved | Root_unresolved | 114 | 7.7199999999999995e-28 | NR | WP_184652782.1 | 157 | g19308 | i0 | 68.4 | 2.98739495798319 | 79 | 21 | 99.6 | 2 | 1 | 237 | 337 | 411 | WP_184652782.1 MULTISPECIES: asparagine--tRNA ligase [Treponema] | diamond | 711 | 114 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | |||
| 31976043 | 31976043 | PRJNA575566_P_NODE_21978_length_222_cov_1.385093_g21781_i0 | PRJNA575566 | 21978 | 222 | 1.385093 | 3.07490646 | Borrelia turcica | 229155 | Bacteria | Bacteria | 78.6 | 5.29e-15 | NR | WP_120103846.1 | 229155 | g21781 | i0 | 53.4 | 3.94594594594595 | 73 | 33 | 98.6 | 1 | 220 | 2 | 228 | 299 | WP_120103846.1 PQQ-dependent sugar dehydrogenase [Borrelia turcica] | diamond | 876 | 78.6 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Borreliaceae | Borrelia | Borrelia turcica |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;