RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA575566" and tax_phylum = "Preaxostyla"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA575566 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
560338 560338 PRJNA575566_P_NODE_8761_length_354_cov_1.180887_g8564_i0 PRJNA575566 8761 354 1.180887 4.18033998 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 82.4 3.83e-16   NR KAJ4459881.1 342808 g8564 i0 54.8 0.61864406779661 73 33 61.9 0 349 131 167 239 KAJ4459881.1 putative Single-stranded TG1-3 DNA-binding protein [Paratrimastix pyriformis] diamond 219 82.4 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
14588814 14588814 PRJNA575566_P_NODE_17932_length_249_cov_1.021277_g17735_i0 PRJNA575566 17932 249 1.021277 2.54297973 uncultured Oxymonadida sp. 413579 Preaxostyla other_Eukaryota 193 1.27e-44   NTclustered gi|119117134|gb|DQ925208.1| 413579 g17735 i0 80.876 6.18072289156626 251 42 99 6 1 248 134 381 Unidentified Oxymonadida clone R21 alpha-tubulin (Atub) mRNA, partial cds blastn 1539 193 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida     uncultured Oxymonadida sp.
19686564 19686564 PRJNA575566_P_NODE_22276_length_220_cov_1.540881_g22079_i0 PRJNA575566 22276 220 1.540881 3.3899382 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 54.7 0.005   NTclustered gi|2794940695|ref|XM_067877144.1| 2049356 g22079 i0 94.444 0.327272727272727 36 1 16 1 7 42 5984 6018 Monocercomonoides exilis uncharacterized protein (MONOS_6873), partial mRNA blastn 72 54.7 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;