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contig_metadata

28 rows where bioproject = "PRJNA575566", tax_phylum = "Discosea" and tax_superkingdom = "Eukaryota"

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analysis 2

tax_superkingdom 1

  • Eukaryota · 28 ✖

tax_phylum 1

  • Discosea · 28 ✖

tax_clade 1

bioproject 1

  • PRJNA575566 · 28 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
560210 560210 PRJNA575566_P_NODE_28321_length_203_cov_0.901408_g28124_i0 PRJNA575566 28321 203 0.901408 1.82985824 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 259 9.71e-65   NTclustered gi|470416357|ref|XM_004336829.1| 1257118 g28124 i0 90 97.7783251231527 200 20 99 0 2 201 560 361 Acanthamoeba castellanii str. Neff fumarate hydratase, class II, putative (ACA1_130590), partial mRNA blastn 19849 259 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
6240436 6240436 PRJNA575566_P_NODE_9565_length_338_cov_0.924188_g9368_i0 PRJNA575566 9565 338 0.924188 3.12375544 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 211 4.97e-50   NTclustered gi|1805599632|gb|MN129744.1| 5756 g9368 i0 78.55 77.6183431952663 331 63 97 7 2 328 229 555 Acanthamoeba sp. strain PSH NADH dehydrogenase subunit 5 (ND5) gene, partial cds; mitochondrial blastn 26235 213 0.990610328638498 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba sp.
6938411 6938411 PRJNA575566_P_NODE_9186_length_344_cov_4.890459_g8989_i0 PRJNA575566 9186 344 4.890459 16.82317896 Cochliopodium actinophorum 703021 Discosea other_Eukaryota 542 1.58e-149   NTclustered gi|330902845|gb|JF298249.1| 703021 g8989 i0 95.362 79.4970930232558 345 8 100 5 1 344 816 1153 Cochliopodium actinophorum clone 1202 18S ribosomal RNA gene, partial sequence blastn 27347 542 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium actinophorum
12039298 12039298 PRJNA575566_P_NODE_3690_length_543_cov_1.470954_g3494_i0 PRJNA575566 3690 543 1.470954 7.98728022 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 298 3.89e-93   NR XP_004337289.1 1257118 g3494 i0 75.1 1 181 45 100 0 543 1 571 751 XP_004337289.1 eukaryotic translation elongation factor 2, putative [Acanthamoeba castellanii str. Neff] diamond 543 298 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13314135 13314135 PRJNA575566_P_NODE_27691_length_204_cov_0.895105_g27494_i0 PRJNA575566 27691 204 0.895105 1.8260142 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 115 1.65e-29   NR XP_004338160.1 1257118 g27494 i0 80.6 1.97058823529412 67 13 98.5 0 202 2 74 140 XP_004338160.1 proteasome subunit beta type7, putative [Acanthamoeba castellanii str. Neff] diamond 402 115 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13314161 13314161 PRJNA575566_P_NODE_2931_length_604_cov_16.416206_g2736_i0 PRJNA575566 2931 604 16.416206 99.15388424 Cochliopodium minus 313997 Discosea other_Eukaryota 462 2.33e-125   NTclustered gi|330902862|gb|JF298257.1| 313997 g2736 i0 99.605 38.4834437086093 253 1 82 0 1 253 504 252 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 23244 462 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
18412153 18412153 PRJNA575566_P_NODE_4075_length_518_cov_2.757112_g3878_i0 PRJNA575566 4075 518 2.757112 14.28184016 Balamuthia mandrillaris 66527 Discosea other_Eukaryota 276 2.7699999999999997e-69   NTclustered gi|918020693|ref|NC_027736.1| 66527 g3878 i0 84.083 54.7683397683398 289 42 55 4 148 432 37325 37037 Balamuthia mandrillaris strain BeN mitochondrion, complete genome blastn 28370 276 1 Eukaryota Amoebozoa   Discosea   Longamoebia Balamuthiidae Balamuthia Balamuthia mandrillaris
18988093 18988093 PRJNA575566_P_NODE_25195_length_208_cov_0.870748_g24998_i0 PRJNA575566 25195 208 0.870748 1.81115584 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 95.5 5.990000000000001e-21   NR XP_004368325.1 1257118 g24998 i0 67.2 1.93269230769231 67 22 96.6 0 201 1 167 233 XP_004368325.1 peptidase M16 inactive domain containing protein [Acanthamoeba castellanii str. Neff] diamond 402 95.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22237269 22237269 PRJNA575566_P_NODE_4838_length_475_cov_2.707729_g4641_i0 PRJNA575566 4838 475 2.707729 12.86171275 Cochliopodium marrii 2652063 Discosea other_Eukaryota 634 3.609999999999999e-177   NTclustered gi|1758131109|gb|MN389530.1| 2652063 g4641 i0 96.134 61.7284210526316 388 15 82 0 1 388 388 1 Cochliopodium marrii isolate 1 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial blastn 29321 634 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium marrii
23512432 23512432 PRJNA575566_P_NODE_2339_length_676_cov_2.616260_g2154_i0 PRJNA575566 2339 676 2.61626 17.6859176 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 323 5.65e-102   NR XP_004337289.1 1257118 g2154 i0 76.2 1.90384615384615 214 51 95 0 3 644 38 251 XP_004337289.1 eukaryotic translation elongation factor 2, putative [Acanthamoeba castellanii str. Neff] diamond 1287 323 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27300858 27300858 PRJNA575566_P_NODE_14243_length_279_cov_1.100917_g14046_i0 PRJNA575566 14243 279 1.100917 3.07155843 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 45.1 0.00921   NR XP_004349618.1 1257118 g14046 i0 27.1 0.913978494623656 85 60 89.2 1 13 261 167 251 XP_004349618.1 uncharacterized protein ACA1_142210 [Acanthamoeba castellanii str. Neff] diamond 255 45.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27332599 27332599 PRJNA575566_P_NODE_29663_length_201_cov_0.914286_g29466_i0 PRJNA575566 29663 201 0.914286 1.83771486 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 52.4 8.58e-6   NR XP_004339838.1 1257118 g29466 i0 43.6 0.82089552238806 55 31 82.1 0 166 2 710 764 XP_004339838.1 Beige/BEACH domain containing protein [Acanthamoeba castellanii str. Neff] diamond 165 52.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27585019 27585019 PRJNA575566_P_NODE_22784_length_217_cov_1.064103_g22587_i0 PRJNA575566 22784 217 1.064103 2.30910351 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 63.2 1.67e-9   NR XP_004345878.1 1257118 g22587 i0 60 0.552995391705069 40 16 55.3 0 121 2 17 56 XP_004345878.1 argininosuccinate lyase, putative [Acanthamoeba castellanii str. Neff] diamond 120 63.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27585023 27585023 PRJNA575566_P_NODE_25104_length_208_cov_0.870748_g24907_i0 PRJNA575566 25104 208 0.870748 1.81115584 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 71.2 2.14e-12   NR XP_004356741.1 1257118 g24907 i0 46.2 1.5 104 21 99.5 3 208 2 257 360 XP_004356741.1 DEAD/H (AspGlu-Ala-Asp/His) box polypeptide 11, putative [Acanthamoeba castellanii str. Neff] diamond 312 71.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27837488 27837488 PRJNA575566_P_NODE_27604_length_204_cov_0.895105_g27407_i0 PRJNA575566 27604 204 0.895105 1.8260142 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 60.8 9.15e-9   NR XP_004347133.1 1257118 g27407 i0 49.1 2.44117647058824 53 27 77.9 0 197 39 2026 2078 XP_004347133.1 protein kinase domain containing protein [Acanthamoeba castellanii str. Neff] diamond 498 60.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28342834 28342834 PRJNA575566_P_NODE_5426_length_450_cov_1.547558_g5229_i0 PRJNA575566 5426 450 1.547558 6.964011 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 99.4 6.58e-21   NR XP_004338539.1 1257118 g5229 i0 48.9 0.613333333333333 92 47 61.3 0 1 276 492 583 XP_004338539.1 protein kinase domain containing protein [Acanthamoeba castellanii str. Neff] diamond 276 99.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29524715 29524715 PRJNA575566_P_NODE_16330_length_261_cov_1.280000_g16133_i0 PRJNA575566 16330 261 1.28 3.3408 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 106 2.07e-24   NR XP_004367478.1 1257118 g16133 i0 66.3 2.94252873563218 86 29 98.9 0 260 3 493 578 XP_004367478.1 heat shock protein 90 alpha, putative [Acanthamoeba castellanii str. Neff] diamond 768 106 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29574008 29574008 PRJNA575566_P_NODE_28570_length_203_cov_0.901408_g28373_i0 PRJNA575566 28570 203 0.901408 1.82985824 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 73.6 3e-13   NR XP_004354485.1 1257118 g28373 i0 55.7 0.901477832512315 61 27 90.1 0 200 18 605 665 XP_004354485.1 ABC2 type transporter, putative [Acanthamoeba castellanii str. Neff] diamond 183 73.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29636981 29636981 PRJNA575566_P_NODE_28870_length_202_cov_0.907801_g28673_i0 PRJNA575566 28870 202 0.907801 1.83375802 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 85.1 2.57e-17   NR XP_004341571.1 1257118 g28673 i0 68.1 1.02475247524752 69 20 99.5 1 2 202 183 251 XP_004341571.1 Endomembrane protein 70 subfamily [Acanthamoeba castellanii str. Neff] diamond 207 85.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30301172 30301172 PRJNA575566_P_NODE_10492_length_323_cov_1.011450_g10295_i0 PRJNA575566 10492 323 1.01145 3.2669835 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 60.5 5.73e-8   NR XP_004339741.1 1257118 g10295 i0 34.4 0.863777089783282 93 61 86.4 0 5 283 187 279 XP_004339741.1 Armadillo/betacatenin-like repeat domain containing protein [Acanthamoeba castellanii str. Neff] diamond 279 60.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31501847 31501847 PRJNA575566_P_NODE_30096_length_201_cov_0.914286_g29899_i0 PRJNA575566 30096 201 0.914286 1.83771486 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 111 1.6e-26   NR XP_004338368.1 1257118 g29899 i0 75.8 0.985074626865672 66 16 98.5 0 3 200 687 752 XP_004338368.1 RNA polymerase Rpb1 protein [Acanthamoeba castellanii str. Neff] diamond 198 111 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31722974 31722974 PRJNA575566_P_NODE_28357_length_203_cov_0.901408_g28160_i0 PRJNA575566 28357 203 0.901408 1.82985824 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 95.5 2.61e-22   NR XP_004349741.1 1257118 g28160 i0 64.2 0.990147783251232 67 24 99 0 201 1 40 106 XP_004349741.1 uncharacterized protein ACA1_034610 [Acanthamoeba castellanii str. Neff] diamond 201 95.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32197670 32197670 PRJNA575566_P_NODE_25678_length_207_cov_0.876712_g25481_i0 PRJNA575566 25678 207 0.876712 1.81479384 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 99.4 8.249999999999999e-23   NR XP_004339984.1 1257118 g25481 i0 65.7 1.01449275362319 70 23 100 1 207 1 36 105 XP_004339984.1 uncharacterized protein ACA1_208450 [Acanthamoeba castellanii str. Neff] diamond 210 99.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32211267 32211267 PRJNA575566_P_NODE_18538_length_244_cov_1.398907_g18341_i0 PRJNA575566 18538 244 1.398907 3.41333308 root 1 Root_unresolved Root_unresolved 88.6 1.86e-20   NR 1PRQ_A 5755 g18341 i0 73.2 4.81967213114754 56 15 68.9 0 243 76 70 125 1PRQ_A Chain A, PROFILIN IA [Acanthamoeba castellanii] diamond 1176 88.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32229452 32229452 PRJNA575566_P_NODE_26458_length_206_cov_0.882759_g26261_i0 PRJNA575566 26458 206 0.882759 1.81848354 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 106 7.27e-25   NR XP_004353366.1 1257118 g26261 i0 70.6 0.990291262135922 68 18 97.6 2 202 2 754 820 XP_004353366.1 valine-tRNA ligase [Acanthamoeba castellanii str. Neff] diamond 204 106 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32387453 32387453 PRJNA575566_P_NODE_25719_length_207_cov_0.876712_g25522_i0 PRJNA575566 25719 207 0.876712 1.81479384 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 43.1 0.0123   NR XP_004338762.1 1257118 g25522 i0 41.5 1.53623188405797 53 30 76.8 1 160 2 91 142 XP_004338762.1 uncharacterized protein ACA1_120360, partial [Acanthamoeba castellanii str. Neff] diamond 318 43.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32734864 32734864 PRJNA575566_P_NODE_26440_length_206_cov_0.882759_g26243_i0 PRJNA575566 26440 206 0.882759 1.81848354 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 105 2.52e-24   NR XP_004340760.1 1257118 g26243 i0 66.2 0.990291262135922 68 23 99 0 205 2 429 496 XP_004340760.1 copine subfamily protein [Acanthamoeba castellanii str. Neff] diamond 204 105 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32829235 32829235 PRJNA575566_P_NODE_20520_length_231_cov_1.505882_g20323_i0 PRJNA575566 20520 231 1.505882 3.47858742 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 46.6 0.00138   NR XP_004338595.1 1257118 g20323 i0 41.8 0.714285714285714 55 31 71.4 1 3 167 245 298 XP_004338595.1 cullin family protein [Acanthamoeba castellanii str. Neff] diamond 165 46.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;