RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA575566", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 4 ✖

tax_phylum 1

  • Acidobacteriota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA575566 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26636307 26636307 PRJNA575566_P_NODE_28341_length_203_cov_0.901408_g28144_i0 PRJNA575566 28341 203 0.901408 1.82985824 Acidobacteriota bacterium 1978231 Bacteria Bacteria 42 0.0406   NR MDA1313252.1 1978231 g28144 i0 39.5 0.561576354679803 38 19 56.2 1 119 6 299 332 MDA1313252.1 glycosyltransferase [Acidobacteriota bacterium] diamond 114 42 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27237528 27237528 PRJNA575566_P_NODE_28223_length_203_cov_0.901408_g28026_i0 PRJNA575566 28223 203 0.901408 1.82985824 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 63.9 3.98e-10   NR HEY6213560.1 2910147 g28026 i0 48.4 1.89162561576355 64 33 94.6 0 201 10 191 254 HEY6213560.1 SDR family oxidoreductase [Vicinamibacterales bacterium] diamond 384 63.9 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
29132336 29132336 PRJNA575566_P_NODE_3889_length_530_cov_1.008529_g3692_i0 PRJNA575566 3889 530 1.008529 5.3452037 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 82.8 1.98e-15   NR HTM27268.1 2910147 g3692 i0 29.7 1.83396226415094 165 113 93.4 1 512 18 57 218 HTM27268.1 hypothetical protein [Vicinamibacterales bacterium] diamond 972 82.8 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
31912844 31912844 PRJNA575566_P_NODE_11917_length_304_cov_1.053498_g11720_i0 PRJNA575566 11917 304 1.053498 3.20263392 Acidobacteriota bacterium 1978231 Bacteria Bacteria 102 5.629999999999999e-23   NR MFN7973937.1 1978231 g11720 i0 48.5 3.86842105263158 99 48 95.7 2 304 14 435 532 MFN7973937.1 aldehyde dehydrogenase family protein [Acidobacteriota bacterium] diamond 1176 102 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;