RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA575566" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Orthornavirae · 9 ✖

bioproject 1

  • PRJNA575566 · 9 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
560252 560252 PRJNA575566_P_NODE_381_length_1492_cov_2.052411_g312_i0 PRJNA575566 381 1492 2.052411 30.62197212 Zebrafish picornavirus 1 2304617 Viruses Viruses 2700 0   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g312 i0 99.33 3 1492 10 100 0 1 1492 6370 7861 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 4476 2700 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
3110908 3110908 PRJNA575566_P_NODE_1823_length_761_cov_1.434286_g1645_i0 PRJNA575566 1823 761 1.434286 10.91491646 Zebrafish picornavirus 1 2304617 Viruses Viruses 1334 0   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g1645 i0 98.417 2.99605781865966 758 12 99 0 1 758 1059 1816 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 2280 1334 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
5663626 5663626 PRJNA575566_P_NODE_10205_length_327_cov_2.687970_g10008_i0 PRJNA575566 10205 327 2.68797 8.7896619 Zebrafish picornavirus 1 2304617 Viruses Viruses 593 4.0699999999999987e-165   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g10008 i0 99.388 3 327 2 100 0 1 327 583 257 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 981 593 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
9488614 9488614 PRJNA575566_P_NODE_5588_length_443_cov_2.479058_g5391_i0 PRJNA575566 5588 443 2.479058 10.98222694 Zebrafish picornavirus 1 2304617 Viruses Viruses 808 0   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g5391 i0 99.549 3 443 2 100 0 1 443 4428 3986 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 1329 808 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
9488631 9488631 PRJNA575566_P_NODE_708_length_1172_cov_1.179118_g594_i0 PRJNA575566 708 1172 1.179118 13.81926296 Zebrafish picornavirus 1 2304617 Viruses Viruses 2071 0   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g594 i0 98.549 3 1172 17 100 0 1 1172 4394 5565 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 3516 2071 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
18411859 18411859 PRJNA575566_P_NODE_12915_length_292_cov_1.896104_g12718_i0 PRJNA575566 12915 292 1.896104 5.53662368 Zebrafish picornavirus 1 2304617 Viruses Viruses 427 3.8499999999999997e-115   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g12718 i0 93.127 2.98630136986301 291 20 99 0 2 292 2834 2544 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 872 427 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
23512557 23512557 PRJNA575566_P_NODE_3819_length_534_cov_1.638478_g3623_i0 PRJNA575566 3819 534 1.638478 8.74947252 Zebrafish picornavirus 1 2304617 Viruses Viruses 970 0   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g3623 i0 99.438 3 534 3 100 0 1 534 6360 5827 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 1602 970 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
23512605 23512605 PRJNA575566_P_NODE_6639_length_406_cov_1.933333_g6442_i0 PRJNA575566 6639 406 1.933333 7.84933198 Zebrafish picornavirus 1 2304617 Viruses Viruses 678 0   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g6442 i0 96.798 3 406 13 100 0 1 406 3459 3864 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 1218 678 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
24786089 24786089 PRJNA575566_P_NODE_12120_length_301_cov_1.766667_g11923_i0 PRJNA575566 12120 301 1.766667 5.31766767 Zebrafish picornavirus 1 2304617 Viruses Viruses 512 1.07e-140   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g11923 i0 97.342 3 301 8 100 0 1 301 2023 2323 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 903 512 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;