RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA575566", tax_kingdom = "Metazoa" and tax_phylum = "Brachiopoda"

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tax_superkingdom 1

tax_phylum 1

  • Brachiopoda · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA575566 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13314247 13314247 PRJNA575566_P_NODE_751_length_1144_cov_8.985226_g633_i0 PRJNA575566 751 1144 8.985226 102.79098544 Metazoa 33208 Brachiopoda other_Eukaryota 392 2.4399999999999998e-132   NR XP_013409929.1 7574 g633 i0 59.8 3.31730769230769 311 120 80.2 3 108 1025 32 342 XP_013409929.1 cathepsin B [Lingula anatina] diamond 3795 392 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
27648371 27648371 PRJNA575566_P_NODE_28644_length_203_cov_0.901408_g28447_i0 PRJNA575566 28644 203 0.901408 1.82985824 Lingula anatina 7574 Brachiopoda other_Eukaryota 92.4 5.09e-20   NR XP_013421954.1 7574 g28447 i0 63.6 10.7290640394089 66 24 97.5 0 200 3 330 395 XP_013421954.1 rab GDP dissociation inhibitor beta [Lingula anatina] diamond 2178 92.4 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;