RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA575566", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA575566 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28090172 28090172 PRJNA575566_P_NODE_27285_length_205_cov_0.888889_g27088_i0 PRJNA575566 27285 205 0.888889 1.82222245 Blastocladiella emersonii ATCC 22665 1313167 Fungi Fungi 57 1.94e-7   NR KAI9159285.1 1313167 g27088 i0 52.4 1.85853658536585 63 29 92.2 1 204 16 66 127 KAI9159285.1 ccr4 associated factor [Blastocladiella emersonii ATCC 22665] diamond 381 57 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
30914741 30914741 PRJNA575566_P_NODE_6294_length_417_cov_1.564607_g6097_i0 PRJNA575566 6294 417 1.564607 6.52441119 Eukaryota 2759 Fungi Fungi 184 7.34e-54   NR KAJ1507281.1 945690 g6097 i0 62.9 20.5035971223022 143 47 100 2 417 1 93 233 KAJ1507281.1 60S ribosomal protein L3 [Coelomomyces lativittatus] diamond 8550 184 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Coelomomycetaceae Coelomomyces Coelomomyces lativittatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;