RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA575566", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA575566 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12039261 12039261 PRJNA575566_P_NODE_28910_length_202_cov_0.907801_g28713_i0 PRJNA575566 28910 202 0.907801 1.83375802 Candidatus Chlorohelix allophototropha 3003348 Bacteria Bacteria 241 3.5e-59   NTclustered gi|2530750984|gb|CP128400.1| 3003348 g28713 i0 88.177 934.628712871287 203 23 100 1 1 202 320024 320226 Candidatus Chlorohelix allophototropha isolate L227-S17 chromosome 2, complete sequence blastn 188795 241 1 Bacteria   Bacillati Chloroflexota Chloroflexia Candidatus Chloroheliales Candidatus Chloroheliaceae Candidatus Chlorohelix Candidatus Chlorohelix allophototropha
18412097 18412097 PRJNA575566_P_NODE_27915_length_204_cov_0.895105_g27718_i0 PRJNA575566 27915 204 0.895105 1.8260142 Candidatus Chlorohelix allophototropha 3003348 Bacteria Bacteria 231 2.13e-56   NTclustered gi|2530750984|gb|CP128400.1| 3003348 g27718 i0 95.804 401.612745098039 143 6 70 0 62 204 319752 319894 Candidatus Chlorohelix allophototropha isolate L227-S17 chromosome 2, complete sequence blastn 81929 231 1 Bacteria   Bacillati Chloroflexota Chloroflexia Candidatus Chloroheliales Candidatus Chloroheliaceae Candidatus Chlorohelix Candidatus Chlorohelix allophototropha

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;