contig_metadata
20 rows where bioproject = "PRJNA575566", tax_kingdom = "Bacillati" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3111189 | 3111189 | PRJNA575566_P_NODE_9963_length_331_cov_1.862963_g9766_i0 | PRJNA575566 | 9963 | 331 | 1.862963 | 6.16640753 | Hathewaya histolytica | 1498 | Bacteria | Bacteria | 52.8 | 0.031 | NTclustered | gi|1640036048|emb|LR590481.1| | 1498 | g9766 | i0 | 100 | 0.0845921450151057 | 28 | 0 | 8 | 0 | 43 | 70 | 1995814 | 1995841 | Hathewaya histolytica strain NCTC503 genome assembly, chromosome: 1 | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Hathewaya | Hathewaya histolytica | ||
| 7514629 | 7514629 | PRJNA575566_P_NODE_30026_length_201_cov_0.914286_g29829_i0 | PRJNA575566 | 30026 | 201 | 0.914286 | 1.83771486 | root | 1 | Root_unresolved | Root_unresolved | 372 | 1.18e-98 | NTclustered | gi|1140122741|gb|CP019562.1| | 1303 | g29829 | i0 | 100 | 103 | 201 | 0 | 100 | 0 | 1 | 201 | 1572842 | 1572642 | Streptococcus oralis strain S.MIT/ORALIS-351 chromosome, complete genome | blastn | 20703 | 372 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 8212996 | 8212996 | PRJNA575566_P_NODE_13067_length_291_cov_0.995652_g12870_i0 | PRJNA575566 | 13067 | 291 | 0.995652 | 2.89734732 | Rossellomorea sedimentorum | 3115294 | Bacteria | Bacteria | 52.8 | 0.027 | NTclustered | gi|2872182794|gb|CP143546.1| | 3115294 | g12870 | i0 | 100 | 0.0962199312714777 | 28 | 0 | 10 | 0 | 229 | 256 | 3908371 | 3908398 | Bacillus sp. SCS-153A chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Rossellomorea | Rossellomorea sedimentorum | ||
| 8213275 | 8213275 | PRJNA575566_P_NODE_30467_length_188_cov_2.015748_g30270_i0 | PRJNA575566 | 30467 | 188 | 2.015748 | 3.78960624 | Firmicutes bacterium ADurb.Bin356 | 1852890 | Bacteria | Bacteria | 102 | 3.02e-24 | NR | OQA16478.1 | 1852890 | g30270 | i0 | 82.3 | 0.98936170212766 | 62 | 11 | 98.9 | 0 | 186 | 1 | 244 | 305 | OQA16478.1 MAG: Glyceraldehyde-3-phosphate dehydrogenase A [Firmicutes bacterium ADurb.Bin356] | diamond | 186 | 102 | 1 | Bacteria | Bacillati | Bacillota | Firmicutes bacterium ADurb.Bin356 | ||||||
| 8789519 | 8789519 | PRJNA575566_P_NODE_15407_length_268_cov_2.671498_g15210_i0 | PRJNA575566 | 15407 | 268 | 2.671498 | 7.15961464 | Streptococcus | 1301 | Bacteria | Bacteria | 494 | 3.39e-135 | NTclustered | gi|1943211519|gb|CP065707.1| | 1303 | g15210 | i0 | 100 | 341.041044776119 | 267 | 0 | 99 | 0 | 2 | 268 | 424001 | 424267 | Streptococcus oralis strain FDAARGOS_885 chromosome, complete genome | blastn | 91399 | 496 | 0.995967741935484 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 9488307 | 9488307 | PRJNA575566_P_NODE_15008_length_272_cov_1.213270_g14811_i0 | PRJNA575566 | 15008 | 272 | 1.21327 | 3.3000944 | Romboutsia sp. CE17 | 2724150 | Bacteria | Bacteria | 52.8 | 0.025 | NTclustered | gi|1831577921|gb|CP051144.1| | 2724150 | g14811 | i0 | 100 | 0.102941176470588 | 28 | 0 | 10 | 0 | 63 | 90 | 1915318 | 1915345 | Romboutsia sp. CE17 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Romboutsia | Romboutsia sp. CE17 | ||
| 9488431 | 9488431 | PRJNA575566_P_NODE_22748_length_217_cov_1.230769_g22551_i0 | PRJNA575566 | 22748 | 217 | 1.230769 | 2.67076873 | uncultured Clostridia bacterium | 244328 | Bacteria | Bacteria | 126 | 1.11e-24 | NTclustered | gi|2729058716|emb|OZ007016.1| | 244328 | g22551 | i0 | 81.29 | 32.0967741935484 | 155 | 29 | 71 | 0 | 42 | 196 | 641205 | 641051 | MAG: uncultured Clostridia bacterium isolate 6737_HOM_CTRL_s71.ctg000086c_hifiasm_circ MAG genome assembly, chromosome: 1 | blastn | 6965 | 126 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | uncultured Clostridia bacterium | |||||
| 10764251 | 10764251 | PRJNA575566_P_NODE_17569_length_251_cov_1.347368_g17372_i0 | PRJNA575566 | 17569 | 251 | 1.347368 | 3.38189368 | Ligilactobacillus salivarius | 1624 | Bacteria | Bacteria | 52.8 | 0.023 | NTclustered | gi|2276881336|gb|CP101530.1| | 1624 | g17372 | i0 | 100 | 0.111553784860558 | 28 | 0 | 11 | 0 | 91 | 118 | 525665 | 525638 | Ligilactobacillus salivarius strain SNK-6 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Ligilactobacillus | Ligilactobacillus salivarius | ||
| 12039222 | 12039222 | PRJNA575566_P_NODE_26370_length_206_cov_0.882759_g26173_i0 | PRJNA575566 | 26370 | 206 | 0.882759 | 1.81848354 | Streptococcus sp. FSL K6-1323 | 2954513 | Bacteria | Bacteria | 381 | 2.0199999999999994e-101 | NTclustered | gi|2723658837|gb|CP152039.1| | 2954513 | g26173 | i0 | 100 | 99.868932038835 | 206 | 0 | 100 | 0 | 1 | 206 | 2009385 | 2009180 | Streptococcus sp. FSL K6-1323 chromosome, complete genome | blastn | 20573 | 381 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus sp. FSL K6-1323 | ||
| 14588988 | 14588988 | PRJNA575566_P_NODE_27992_length_204_cov_0.895105_g27795_i0 | PRJNA575566 | 27992 | 204 | 0.895105 | 1.8260142 | Streptococcus sp. FDAARGOS_192 | 1839799 | Bacteria | Bacteria | 326 | 9.5e-85 | NTclustered | gi|1352481846|gb|CP020429.2| | 1839799 | g27795 | i0 | 96.447 | 13.828431372549 | 197 | 7 | 99 | 0 | 8 | 204 | 19199 | 19003 | Streptococcus sp. FDAARGOS_192 plasmid unnamed1, complete sequence | blastn | 2821 | 326 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus sp. FDAARGOS_192 | ||
| 16439433 | 16439433 | PRJNA575566_P_NODE_4273_length_505_cov_2.981982_g4076_i0 | PRJNA575566 | 4273 | 505 | 2.981982 | 15.0590091 | root | 1 | Root_unresolved | Root_unresolved | 771 | 0 | NTclustered | gi|407866|emb|Z26888.1| | 29378 | g4076 | i0 | 94.314 | 124.205940594059 | 510 | 18 | 100 | 8 | 1 | 505 | 9 | 512 | S.arlettae gene for 16S ribosomal RNA | blastn | 62724 | 771 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus arlettae | ||
| 17714650 | 17714650 | PRJNA575566_P_NODE_21474_length_225_cov_1.676829_g21277_i0 | PRJNA575566 | 21474 | 225 | 1.676829 | 3.77286525 | Bacillaceae | 186817 | Bacteria | Bacteria | 385 | 1.74e-102 | NTclustered | gi|2511289955|gb|CP126088.1| | 86664 | g21277 | i0 | 97.768 | 799.622222222222 | 224 | 4 | 99 | 1 | 1 | 224 | 11308 | 11530 | Priestia flexa strain CCW CN82 chromosome, complete genome | blastn | 179915 | 385 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Priestia | Priestia flexa | ||
| 20962306 | 20962306 | PRJNA575566_P_NODE_25517_length_207_cov_0.876712_g25320_i0 | PRJNA575566 | 25517 | 207 | 0.876712 | 1.81479384 | Limosilactobacillus mucosae | 97478 | Bacteria | Bacteria | 350 | 5.74e-92 | NTclustered | gi|1874469609|gb|CP058954.1| | 97478 | g25320 | i0 | 97.101 | 6.14975845410628 | 207 | 6 | 100 | 0 | 1 | 207 | 1459042 | 1459248 | Limosilactobacillus mucosae strain A1 chromosome, complete genome | blastn | 1273 | 350 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Limosilactobacillus | Limosilactobacillus mucosae | ||
| 24088718 | 24088718 | PRJNA575566_P_NODE_25219_length_208_cov_0.870748_g25022_i0 | PRJNA575566 | 25219 | 208 | 0.870748 | 1.81115584 | Exiguobacterium | 33986 | Bacteria | Bacteria | 381 | 2.0499999999999995e-101 | NTclustered | gi|2844360308|gb|CP172296.1| | 340146 | g25022 | i0 | 100 | 724.322115384615 | 206 | 0 | 99 | 0 | 1 | 206 | 39785 | 39580 | Exiguobacterium mexicanum strain MM chromosome, complete genome | blastn | 150659 | 381 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Exiguobacterium | Exiguobacterium mexicanum | |||
| 25362979 | 25362979 | PRJNA575566_P_NODE_11820_length_305_cov_1.184426_g11623_i0 | PRJNA575566 | 11820 | 305 | 1.184426 | 3.6124993 | Exiguobacterium | 33986 | Bacteria | Bacteria | 542 | 1.38e-149 | NTclustered | gi|2274429004|gb|CP101462.1| | 33987 | g11623 | i0 | 98.689 | 743.039344262295 | 305 | 4 | 100 | 0 | 1 | 305 | 12924 | 13228 | Exiguobacterium aurantiacum strain CX2 chromosome, complete genome | blastn | 226627 | 542 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Exiguobacterium | Exiguobacterium aurantiacum | |||
| 26921340 | 26921340 | PRJNA575566_P_NODE_28522_length_203_cov_0.901408_g28325_i0 | PRJNA575566 | 28522 | 203 | 0.901408 | 1.82985824 | Clostridium lundense | 319475 | Bacteria | Bacteria | 72.8 | 5.57e-13 | NR | WP_027623033.1 | 319475 | g28325 | i0 | 48.5 | 2.89655172413793 | 66 | 34 | 97.5 | 0 | 203 | 6 | 378 | 443 | WP_027623033.1 pyridoxal phosphate-dependent decarboxylase family protein [Clostridium lundense] | diamond | 588 | 72.8 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium lundense | ||
| 28311363 | 28311363 | PRJNA575566_P_NODE_28186_length_203_cov_1.352113_g27989_i0 | PRJNA575566 | 28186 | 203 | 1.352113 | 2.74478939 | Lachnospira sp. | 2049031 | Bacteria | Bacteria | 46.2 | 0.00132 | NR | MCI8426399.1 | 2049031 | g27989 | i0 | 34.4 | 3.59113300492611 | 64 | 35 | 94.6 | 1 | 12 | 203 | 550 | 606 | MCI8426399.1 DNA internalization-related competence protein ComEC/Rec2 [Lachnospira sp.] | diamond | 729 | 46.2 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Lachnospira | Lachnospira sp. | ||
| 29858307 | 29858307 | PRJNA575566_P_NODE_21471_length_225_cov_1.853659_g21274_i0 | PRJNA575566 | 21471 | 225 | 1.853659 | 4.17073275 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 47.4 | 7.14e-4 | NR | MBQ7391938.1 | 2044939 | g21274 | i0 | 43.1 | 0.68 | 51 | 27 | 65.3 | 1 | 7 | 153 | 388 | 438 | MBQ7391938.1 InlB B-repeat-containing protein [Clostridia bacterium] | diamond | 153 | 47.4 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 31090590 | 31090590 | PRJNA575566_P_NODE_23735_length_211_cov_1.280000_g23538_i0 | PRJNA575566 | 23735 | 211 | 1.28 | 2.7008 | Bacillus kwashiorkori | 1522318 | Bacteria | Bacteria | 95.1 | 4.41e-21 | NR | WP_062350715.1 | 1522318 | g23538 | i0 | 62.3 | 1.97630331753555 | 69 | 26 | 98.1 | 0 | 207 | 1 | 91 | 159 | WP_062350715.1 FAD/NAD(P)-binding oxidoreductase [Bacillus kwashiorkori] | diamond | 417 | 95.1 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus kwashiorkori | ||
| 31578567 | 31578567 | PRJNA575566_P_NODE_13836_length_283_cov_1.153153_g13639_i0 | PRJNA575566 | 13836 | 283 | 1.153153 | 3.26342299 | Bacilli | 91061 | Bacteria | Bacteria | 77 | 3.24e-14 | NR | MCA9766345.1 | 48221 | g13639 | i0 | 44.8 | 11.1519434628975 | 96 | 47 | 99.6 | 3 | 282 | 1 | 92 | 183 | MCA9766345.1 inositol 2-dehydrogenase [Carnobacterium sp.] | diamond | 3156 | 77.4 | 0.994832041343669 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Carnobacteriaceae | Carnobacterium | Carnobacterium sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;