RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA575566", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA575566 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10764330 10764330 PRJNA575566_P_NODE_22289_length_220_cov_1.289308_g22092_i0 PRJNA575566 22289 220 1.289308 2.8364776 Plasmodium relictum 85471 SAR_Eukaryotes SAR_Eukaryotes 150 6.72e-32   NTclustered gi|1620142820|ref|XM_028677298.1| 85471 g22092 i0 87.597 30.6954545454545 129 16 59 0 92 220 231 103 Plasmodium relictum ubiquitin-60S ribosomal protein L40, putative (PRELSG_1104600), partial mRNA blastn 6753 150 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium relictum
28311365 28311365 PRJNA575566_P_NODE_29466_length_201_cov_2.121429_g29269_i0 PRJNA575566 29466 201 2.121429 4.26407229 Theileria equi strain WA 1537102 SAR_Eukaryotes SAR_Eukaryotes 92.4 1.49e-21   NR XP_004829363.1 1537102 g29269 i0 63.1 1.95522388059702 65 24 97 0 5 199 19 83 XP_004829363.1 60S ribosomal protein L17, putative [Theileria equi strain WA] diamond 393 92.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria equi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;