contig_metadata
5 rows where bioproject = "PRJNA575566", tax_clade = "PVC group" and tax_phylum = "Chlamydiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3110794 | 3110794 | PRJNA575566_P_NODE_11403_length_310_cov_1.582329_g11206_i0 | PRJNA575566 | 11403 | 310 | 1.582329 | 4.9052199 | Parachlamydiales bacterium | 2052178 | Bacteria | Bacteria | 499 | 8.6e-137 | NTclustered | gi|2874253890|emb|OY970065.1| | 2052178 | g11206 | i0 | 95.806 | 156.21935483871 | 310 | 12 | 100 | 1 | 1 | 310 | 629327 | 629019 | MAG: Parachlamydiales bacterium isolate MFD09286.bin.c.6 genome assembly, chromosome: 1 | blastn | 48428 | 499 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiales bacterium | |||
| 3110911 | 3110911 | PRJNA575566_P_NODE_18323_length_246_cov_1.037838_g18126_i0 | PRJNA575566 | 18323 | 246 | 1.037838 | 2.55308148 | Parachlamydiales bacterium | 2052178 | Bacteria | Bacteria | 361 | 3.25e-95 | NTclustered | gi|2874253890|emb|OY970065.1| | 2052178 | g18126 | i0 | 93.117 | 21.8048780487805 | 247 | 15 | 100 | 2 | 1 | 246 | 627471 | 627716 | MAG: Parachlamydiales bacterium isolate MFD09286.bin.c.6 genome assembly, chromosome: 1 | blastn | 5364 | 361 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiales bacterium | |||
| 19686727 | 19686727 | PRJNA575566_P_NODE_5456_length_449_cov_1.154639_g5259_i0 | PRJNA575566 | 5456 | 449 | 1.154639 | 5.18432911 | Parachlamydiales bacterium | 2052178 | Bacteria | Bacteria | 697 | 0 | NTclustered | gi|2874253890|emb|OY970065.1| | 2052178 | g5259 | i0 | 94.678 | 169.080178173719 | 451 | 21 | 100 | 3 | 1 | 449 | 626941 | 627390 | MAG: Parachlamydiales bacterium isolate MFD09286.bin.c.6 genome assembly, chromosome: 1 | blastn | 75917 | 697 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiales bacterium | |||
| 20962433 | 20962433 | PRJNA575566_P_NODE_6097_length_423_cov_3.303867_g5900_i0 | PRJNA575566 | 6097 | 423 | 3.303867 | 13.97535741 | Candidatus Fritschea bemisiae | 206681 | Bacteria | Bacteria | 75 | 8.7e-9 | NTclustered | gi|31747861|gb|AY140910.1| | 206681 | g5900 | i0 | 79.091 | 2.725768321513 | 110 | 21 | 26 | 2 | 73 | 180 | 6821 | 6712 | Candidatus Fritschea bemisiae strain Falk YaeL (yaeL) gene, partial cds; putative glycosylhydrolase and putative transposase genes, complete cds; 16S ribosomal RNA and 23S ribosomal RNA genes, complete sequence; putative endonuclease gene, complete cds; 5S ribosomal RNA gene, complete sequence; argynyl tRNA synthetase (argS), YjeE (yjeE), probable GTP-binding protein, DNA polymerase III epsilon subunit, and phosphoglycerate kinase (pgk) genes, complete cds; and unknown gene | blastn | 1153 | 75 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Candidatus Fritschea | Candidatus Fritschea bemisiae | |
| 29069202 | 29069202 | PRJNA575566_P_NODE_24548_length_209_cov_0.864865_g24351_i0 | PRJNA575566 | 24548 | 209 | 0.864865 | 1.80756785 | Simkania sp. | 34094 | Bacteria | Bacteria | 48.1 | 2.98e-4 | NR | MBS3903878.1 | 34094 | g24351 | i0 | 43.5 | 0.990430622009569 | 69 | 38 | 99 | 1 | 1 | 207 | 257 | 324 | MBS3903878.1 PDZ domain-containing protein [Simkania sp.] | diamond | 207 | 48.1 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Simkania | Simkania sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;