RNAquarium Metadata Server
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contig_metadata

13 rows where bioproject = "PRJNA575566", tax_clade = "Discoba" and tax_phylum = "Euglenozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 13 ✖

tax_clade 1

  • Discoba · 13 ✖

bioproject 1

  • PRJNA575566 · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1136802 1136802 PRJNA575566_P_NODE_29061_length_202_cov_0.907801_g28864_i0 PRJNA575566 29061 202 0.907801 1.83375802 Monomorphina 298266 Euglenozoa other_Eukaryota 71.3 4.86e-8   NTclustered gi|54634948|gb|AY626054.1| 158828 g28864 i0 81.522 12.6683168316832 92 12 45 4 1 90 722 634 Monomorphina striata strain CCAP 1261/9 16S small subunit ribosomal RNA gene, partial sequence; chloroplast blastn 2559 71.3 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Monomorphina Monomorphina striata
6938348 6938348 PRJNA575566_P_NODE_5386_length_451_cov_8.615385_g5189_i0 PRJNA575566 5386 451 8.615385 38.85538635 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 630 4.409999999999999e-176   NTclustered gi|2026667530|dbj|LC618030.1| 67003 g5189 i0 91.757 144.239467849224 461 27 100 9 1 451 4343 4802 Trypanosoma theileri YMG-11 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, ITS5, partial and complete sequence blastn 65052 630 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
8213240 8213240 PRJNA575566_P_NODE_28047_length_203_cov_36.147887_g27850_i0 PRJNA575566 28047 203 36.147887 73.38021061 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 268 1.6099999999999998e-67   NTclustered gi|1002433687|ref|XR_001548746.1| 157538 g27850 i0 91.327 117.556650246305 196 17 97 0 8 203 15 210 Leptomonas pyrrhocoris 28S ribosomal RNA (LSU-gamma) rRNA blastn 23864 268 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris
14589133 14589133 PRJNA575566_P_NODE_9272_length_343_cov_1.432624_g9075_i0 PRJNA575566 9272 343 1.432624 4.91390032 Entosiphon sulcatum 101493 Euglenozoa other_Eukaryota 197 4.26e-57   NR ABG77330.1 101493 g9075 i0 84.1 9.92711370262391 113 18 98.8 0 343 5 318 430 ABG77330.1 Hsp90, partial [Entosiphon sulcatum] diamond 3405 197 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Entosiphon Entosiphon sulcatum
19686648 19686648 PRJNA575566_P_NODE_2716_length_627_cov_7.224382_g2526_i0 PRJNA575566 2716 627 7.224382 45.29687514 Neobodo designis 312471 Euglenozoa other_Eukaryota 1112 0   NTclustered gi|197723537|gb|EF681922.2| 312471 g2526 i0 98.724 156.741626794258 627 7 100 1 1 627 1242 617 Neobodo designis strain HFCC97 28S ribosomal RNA gene, partial sequence blastn 98277 1112 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
24088729 24088729 PRJNA575566_P_NODE_26499_length_206_cov_0.882759_g26302_i0 PRJNA575566 26499 206 0.882759 1.81848354 Leishmania 5658 Euglenozoa other_Eukaryota 63.9 8.32e-6   NTclustered gi|2794750636|ref|XM_067838376.1| 5663 g26302 i0 83.824 0.990291262135922 68 9 33 2 26 92 157 91 Leishmania enriettii uncharacterized protein (CUR178_06717), partial mRNA blastn 204 63.9 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania enriettii
24786454 24786454 PRJNA575566_P_NODE_7500_length_383_cov_1.732919_g7303_i0 PRJNA575566 7500 383 1.732919 6.63707977 Neobodo designis 312471 Euglenozoa other_Eukaryota 599 1.0399999999999995e-166   NTclustered gi|77994645|gb|DQ207583.1| 312471 g7303 i0 94.805 99.6292428198433 385 18 100 1 1 383 425 41 Neobodo designis strain HFCC306 18S ribosomal RNA gene, partial sequence blastn 38158 599 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
26984559 26984559 PRJNA575566_P_NODE_26942_length_205_cov_0.888889_g26745_i0 PRJNA575566 26942 205 0.888889 1.82222245 Bodo saltans 75058 Euglenozoa other_Eukaryota 90.1 1.63e-20   NR CUG92810.1 75058 g26745 i0 75 0.819512195121951 56 14 82 0 170 3 1 56 CUG92810.1 40S ribosomal protein S21, putative [Bodo saltans] diamond 168 90.1 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
27332594 27332594 PRJNA575566_P_NODE_25743_length_207_cov_0.876712_g25546_i0 PRJNA575566 25743 207 0.876712 1.81479384 Trypanosoma brucei gambiense DAL972 679716 Euglenozoa other_Eukaryota 63.5 9.01e-10   NR XP_011774542.1 679716 g25546 i0 42 1 69 40 100 0 1 207 237 305 XP_011774542.1 heat shock protein DNAJ, putative [Trypanosoma brucei gambiense DAL972] diamond 207 63.5 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma brucei
30553324 30553324 PRJNA575566_P_NODE_24513_length_209_cov_0.864865_g24316_i0 PRJNA575566 24513 209 0.864865 1.80756785 Leishmania tarentolae 5689 Euglenozoa other_Eukaryota 90.9 1.3e-20   NR GET93160.1 5689 g24316 i0 63.1 6.96172248803828 65 24 93.3 0 13 207 60 124 GET93160.1 40S ribosomal protein S18, putative [Leishmania tarentolae] diamond 1455 90.9 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania tarentolae
32166177 32166177 PRJNA575566_P_NODE_19358_length_239_cov_1.078652_g19161_i0 PRJNA575566 19358 239 1.078652 2.57797828 Trypanosoma grayi 71804 Euglenozoa other_Eukaryota 67.8 5.23e-11   NR XP_009310968.1 71804 g19161 i0 42 1.01673640167364 81 43 97.9 2 234 1 408 487 XP_009310968.1 cytochrome P450 [Trypanosoma grayi] diamond 243 67.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma grayi
32211270 32211270 PRJNA575566_P_NODE_29198_length_202_cov_0.907801_g29001_i0 PRJNA575566 29198 202 0.907801 1.83375802 root 1 Root_unresolved Root_unresolved 104 2.61e-24   NR CUG88789.1 75058 g29001 i0 72.3 7.72277227722772 65 18 96.5 0 198 4 259 323 CUG88789.1 UTP-glucose-1-phosphate uridylyltransferase, putative [Bodo saltans] diamond 1560 105 0.990476190476191 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
32766094 32766094 PRJNA575566_P_NODE_17320_length_253_cov_1.333333_g17123_i0 PRJNA575566 17320 253 1.333333 3.37333249 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 57 3.9e-7   NR XP_028877956.1 67003 g17123 i0 50 0.66403162055336 56 24 61.7 1 98 253 266 321 XP_028877956.1 cysteine protease [Trypanosoma theileri] diamond 168 57 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;