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contig_metadata

23 rows where bioproject = "PRJNA572587" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 23 ✖

tax_kingdom 1

bioproject 1

  • PRJNA572587 · 23 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1834440 1834440 PRJNA572587_P_NODE_3582_length_688_cov_6.505477_g3302_i0 PRJNA572587 3582 688 6.505477 44.75768176 Armatimonadota bacterium 2033014 Bacteria Bacteria 306 2.6500000000000003e-100   NR MCL6533712.1 2033014 g3302 i0 97.4 0.667151162790698 153 4 66.7 0 217 675 1 153 MCL6533712.1 molecular chaperone DnaJ [Armatimonadota bacterium] diamond 459 306 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
7513812 7513812 PRJNA572587_P_NODE_24286_length_228_cov_8.564246_g23958_i0 PRJNA572587 24286 228 8.564246 19.52648088 Fimbriimonas 1005038 Bacteria Bacteria 187 5.339999999999998e-43   NTclustered gi|663071213|gb|CP007139.1| 661478 g23958 i0 83.5 9.53508771929824 200 33 88 0 2 201 29582 29781 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 2174 187 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
15861412 15861412 PRJNA572587_P_NODE_19093_length_260_cov_9.658768_g18765_i0 PRJNA572587 19093 260 9.658768 25.1127968 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 329 9.77e-86   NTclustered gi|2314715370|dbj|AP024673.1| 2682145 g18765 i0 91.667 181.973076923077 240 17 92 3 1 240 317090 316854 MAG: Fimbriimonadales bacterium KatS3mg018 DNA, complete genome blastn 47313 329 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
17136675 17136675 PRJNA572587_P_NODE_34954_length_186_cov_29.372263_g34626_i0 PRJNA572587 34954 186 29.372263 54.63240918 Armatimonadota bacterium 2033014 Bacteria Bacteria 116 3.81e-30   NR MCL6531744.1 2033014 g34626 i0 94.6 0.903225806451613 56 3 90.3 0 170 3 154 209 MCL6531744.1 pseudouridine-5'-phosphate glycosidase [Armatimonadota bacterium] diamond 168 116 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
18411048 18411048 PRJNA572587_P_NODE_5055_length_564_cov_12.097087_g4739_i0 PRJNA572587 5055 564 12.097087 68.22757068 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 267 1.82e-66   NTclustered gi|2314715370|dbj|AP024673.1| 2682145 g4739 i0 79.146 6.8794326241134804 398 74 70 7 21 413 1186594 1186201 MAG: Fimbriimonadales bacterium KatS3mg018 DNA, complete genome blastn 3880 267 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
24785203 24785203 PRJNA572587_P_NODE_34760_length_187_cov_7.021739_g34432_i0 PRJNA572587 34760 187 7.021739 13.13065193 Armatimonadota bacterium 2033014 Bacteria Bacteria 52.8 0.016   NTclustered gi|2108374973|gb|CP070648.1| 2033014 g34432 i0 100 0.149732620320856 28 0 15 0 139 166 3308830 3308857 MAG: Armatimonadetes bacterium isolate bin88 chromosome blastn 28 52.8 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27237476 27237476 PRJNA572587_P_NODE_10803_length_359_cov_1.580645_g10476_i0 PRJNA572587 10803 359 1.580645 5.67451555 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 223 1.53e-65   NR MCX7688845.1 2682145 g10476 i0 97.3 0.927576601671309 111 3 92.8 0 25 357 393 503 MCX7688845.1 dockerin type I domain-containing protein [Fimbriimonadales bacterium] diamond 333 223 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
27521774 27521774 PRJNA572587_P_NODE_10223_length_371_cov_4.055901_g9896_i0 PRJNA572587 10223 371 4.055901 15.04739271 Armatimonadota bacterium 2033014 Bacteria Bacteria 205 4.72e-62   NR MCL6533828.1 2033014 g9896 i0 93.2 0.954177897574124 118 8 95.4 0 3 356 158 275 MCL6533828.1 AI-2E family transporter [Armatimonadota bacterium] diamond 354 205 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27743179 27743179 PRJNA572587_P_NODE_2144_length_883_cov_145.744604_g1952_i0 PRJNA572587 2144 883 145.744604 1286.92485332 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 236 2.12e-75   NR MCX7688787.1 2682145 g1952 i0 98.4 0.421291053227633 124 2 42.1 0 591 220 1 124 MCX7688787.1 hypothetical protein [Fimbriimonadales bacterium] diamond 372 236 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
27900583 27900583 PRJNA572587_P_NODE_6945_length_466_cov_2.345324_g6621_i0 PRJNA572587 6945 466 2.345324 10.92920984 Armatimonadota bacterium 2033014 Bacteria Bacteria 175 1.99e-52   NR MCL6531910.1 2033014 g6621 i0 95.5 0.566523605150215 88 4 56.7 0 89 352 1 88 MCL6531910.1 flavin reductase family protein [Armatimonadota bacterium] diamond 264 175 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28072157 28072157 PRJNA572587_P_NODE_12845_length_325_cov_1.974638_g12517_i0 PRJNA572587 12845 325 1.974638 6.4175735 Bacteria 2 Bacteria Bacteria 45.8 7.71e-4   NR GIV22148.1 2033014 g12517 i0 66.7 0.775384615384615 36 12 33.2 0 24 131 37 72 GIV22148.1 MAG: hypothetical protein KatS3mg023_3899 [Armatimonadota bacterium] diamond 252 45.8 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28279437 28279437 PRJNA572587_P_NODE_2266_length_863_cov_2.984029_g2068_i0 PRJNA572587 2266 863 2.984029 25.75217027 Armatimonadota bacterium 2033014 Bacteria Bacteria 340 6.71e-114   NR MCL6534124.1 2033014 g2068 i0 96.7 0.632676709154114 182 6 63.3 0 710 165 1 182 MCL6534124.1 tyrosine recombinase XerC [Armatimonadota bacterium] diamond 546 340 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28451302 28451302 PRJNA572587_P_NODE_7146_length_458_cov_1.677262_g6821_i0 PRJNA572587 7146 458 1.677262 7.68185996 Bacteria 2 Bacteria Bacteria 220 9.18e-64   NR MCL6533925.1 2033014 g6821 i0 86.9 1.70305676855895 130 7 78.6 1 452 93 800 929 MCL6533925.1 DUF1156 domain-containing protein [Armatimonadota bacterium] diamond 780 221 0.995475113122172 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28753242 28753242 PRJNA572587_P_NODE_7567_length_442_cov_7.022901_g7242_i0 PRJNA572587 7567 442 7.022901 31.04122242 Armatimonadota bacterium 2033014 Bacteria Bacteria 132 4.65e-33   NR MER3473648.1 2033014 g7242 i0 63.9 0.658371040723982 97 35 65.8 0 291 1 332 428 MER3473648.1 hypothetical protein [Armatimonadota bacterium] diamond 291 132 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29227108 29227108 PRJNA572587_P_NODE_4649_length_592_cov_2.265193_g4338_i0 PRJNA572587 4649 592 2.265193 13.40994256 Armatimonadota bacterium 2033014 Bacteria Bacteria 205 1.96e-62   NR RMH10829.1 2033014 g4338 i0 83.1 0.597972972972973 118 15 59.8 1 432 79 162 274 RMH10829.1 MAG: site-specific DNA-methyltransferase [Armatimonadota bacterium] diamond 354 205 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30111077 30111077 PRJNA572587_P_NODE_8772_length_407_cov_1.905028_g8446_i0 PRJNA572587 8772 407 1.905028 7.75346396 Armatimonadota bacterium 2033014 Bacteria Bacteria 225 2.82e-71   NR MCS7172409.1 2033014 g8446 i0 89.8 0.943488943488944 128 13 94.3 0 384 1 64 191 MCS7172409.1 branched-chain amino acid ABC transporter permease [Armatimonadota bacterium] diamond 384 225 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30364306 30364306 PRJNA572587_P_NODE_3552_length_691_cov_45.919003_g3272_i0 PRJNA572587 3552 691 45.919003 317.30031073 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 273 1.3699999999999997e-87   NR MEJ5295123.1 2682145 g3272 i0 94.6 0.638205499276411 147 8 63.8 0 226 666 1 147 MEJ5295123.1 rod shape-determining protein RodA [Fimbriimonadales bacterium] diamond 441 273 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
30901078 30901078 PRJNA572587_P_NODE_5234_length_552_cov_65.882704_g4918_i0 PRJNA572587 5234 552 65.882704 363.67252608 Armatimonadota bacterium 2033014 Bacteria Bacteria 179 7.05e-54   NR MCL6448901.1 2033014 g4918 i0 66.9 0.739130434782609 136 45 73.9 0 100 507 1 136 MCL6448901.1 PadR family transcriptional regulator [Armatimonadota bacterium] diamond 408 179 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31944290 31944290 PRJNA572587_P_NODE_43557_length_166_cov_0.871795_g43229_i0 PRJNA572587 43557 166 0.871795 1.4471797 Capsulimonas sp. 2494211 Bacteria Bacteria 101 2.76e-24   NR WP_348221818.1 2494211 g43229 i0 81.1 1.91566265060241 53 10 95.8 0 6 164 160 212 WP_348221818.1 2-oxo acid dehydrogenase subunit E2 [Capsulimonas sp.] diamond 318 101 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales Capsulimonadaceae Capsulimonas Capsulimonas sp.
32229418 32229418 PRJNA572587_P_NODE_18318_length_266_cov_1.645161_g17990_i0 PRJNA572587 18318 266 1.645161 4.37612826 Armatimonadota bacterium 2033014 Bacteria Bacteria 162 2.19e-45   NR MCL6532117.1 2033014 g17990 i0 93.2 0.992481203007519 88 6 99.2 0 1 264 326 413 MCL6532117.1 hypothetical protein [Armatimonadota bacterium] diamond 264 162 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32356064 32356064 PRJNA572587_P_NODE_44279_length_165_cov_0.879310_g43951_i0 PRJNA572587 44279 165 0.87931 1.4508615 Armatimonas sp. 1872638 Bacteria Bacteria 68.2 1.42e-11   NR WP_395140740.1 1872638 g43951 i0 60 1 55 21 100 1 1 165 332 385 WP_395140740.1 DUF6785 family protein [Armatimonas sp.] diamond 165 68.2 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas sp.
32671591 32671591 PRJNA572587_P_NODE_44220_length_165_cov_1.241379_g43892_i0 PRJNA572587 44220 165 1.241379 2.04827535 Armatimonadota bacterium 2033014 Bacteria Bacteria 63.2 1.75e-10   NR MCL6533845.1 2033014 g43892 i0 100 0.581818181818182 32 0 58.2 0 165 70 146 177 MCL6533845.1 cytochrome c [Armatimonadota bacterium] diamond 96 63.2 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32779575 32779575 PRJNA572587_P_NODE_30220_length_202_cov_4.189542_g29892_i0 PRJNA572587 30220 202 4.189542 8.46287484 root 1 Root_unresolved Root_unresolved 47.4 5.13e-4   NR MBC7286469.1 2033014 g29892 i0 43.9 3.22277227722772 57 31 83.2 1 2 169 344 400 MBC7286469.1 DUF262 domain-containing protein [Armatimonadota bacterium] diamond 651 47.4 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;