RNAquarium Metadata Server
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contig_metadata

15 rows where bioproject = "PRJNA572587", tax_kingdom = "Orthornavirae" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 15 ✖

tax_kingdom 1

  • Orthornavirae · 15 ✖

bioproject 1

  • PRJNA572587 · 15 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3109552 3109552 PRJNA572587_P_NODE_13123_length_320_cov_45.782288_g12795_i0 PRJNA572587 13123 320 45.782288 146.5033216 Carlavirus latensdianthi 3427766 Viruses Viruses 58.4 6.45e-4   NTclustered gi|1995060321|gb|MN450069.1| 12164 g12795 i0 94.595 0.115625 37 2 12 0 284 320 51 15 Carnation latent virus isolate KL, complete genome blastn 37 58.4 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
6937107 6937107 PRJNA572587_P_NODE_34026_length_189_cov_30.321429_g33698_i0 PRJNA572587 34026 189 30.321429 57.30750081 Carlavirus latensdianthi 3427766 Viruses Viruses 52.8 0.016   NTclustered gi|1995060321|gb|MN450069.1| 12164 g33698 i0 100 0.148148148148148 28 0 15 0 162 189 42 15 Carnation latent virus isolate KL, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
8211680 8211680 PRJNA572587_P_NODE_13107_length_320_cov_198.726937_g12779_i0 PRJNA572587 13107 320 198.726937 635.9261984 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.008   NTclustered gi|1995060321|gb|MN450069.1| 12164 g12779 i0 100 0.440625 29 0 9 0 292 320 41 13 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
8211980 8211980 PRJNA572587_P_NODE_29947_length_203_cov_8.058442_g29619_i0 PRJNA572587 29947 203 8.058442 16.35863726 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.005   NTclustered gi|1995060321|gb|MN450069.1| 12164 g29619 i0 100 0.142857142857143 29 0 14 0 1 29 15 43 Carnation latent virus isolate KL, complete genome blastn 29 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
8212026 8212026 PRJNA572587_P_NODE_32187_length_195_cov_19.212329_g31859_i0 PRJNA572587 32187 195 19.212329 37.46404155 Carlavirus latensdianthi 3427766 Viruses Viruses 58.4 3.62e-4   NTclustered gi|1995060321|gb|MN450069.1| 12164 g31859 i0 90.909 0.82051282051282 44 3 22 1 153 195 56 13 Carnation latent virus isolate KL, complete genome blastn 160 58.4 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
13312750 13312750 PRJNA572587_P_NODE_20831_length_247_cov_99.893939_g20503_i0 PRJNA572587 20831 247 99.893939 246.73802933 Carlavirus latensdianthi 3427766 Viruses Viruses 62.1 3.71e-5   NTclustered gi|1995060321|gb|MN450069.1| 12164 g20503 i0 88.679 0.781376518218624 53 2 21 4 197 247 63 13 Carnation latent virus isolate KL, complete genome blastn 193 62.1 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
13312841 13312841 PRJNA572587_P_NODE_25851_length_220_cov_13.093567_g25523_i0 PRJNA572587 25851 220 13.093567 28.8058474 Jujube closterovirus 1 3043313 Viruses Viruses 52.8 0.019   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g25523 i0 100 0.127272727272727 28 0 13 0 1 28 8 35 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
15861502 15861502 PRJNA572587_P_NODE_23713_length_231_cov_16.296703_g23385_i0 PRJNA572587 23713 231 16.296703 37.64538393 Jujube closterovirus 1 3043313 Viruses Viruses 52.8 0.021   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g23385 i0 100 0.121212121212121 28 0 12 0 1 28 8 35 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
19685247 19685247 PRJNA572587_P_NODE_18796_length_262_cov_17.492958_g18468_i0 PRJNA572587 18796 262 17.492958 45.83154996 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.007   NTclustered gi|1995060321|gb|MN450069.1| 12164 g18468 i0 89.13 0.709923664122137 46 2 18 3 217 262 55 13 Carnation latent virus isolate KL, complete genome blastn 186 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
19685285 19685285 PRJNA572587_P_NODE_20556_length_249_cov_22.505000_g20228_i0 PRJNA572587 20556 249 22.505 56.03745 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.006   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g20228 i0 100 0.228915662650602 29 0 12 0 221 249 34 6 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
20960798 20960798 PRJNA572587_P_NODE_12337_length_332_cov_24.890459_g12009_i0 PRJNA572587 12337 332 24.890459 82.63632388 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.009   NTclustered gi|1995060321|gb|MN450069.1| 12164 g12009 i0 96.875 0.518072289156627 32 1 10 0 1 32 13 44 Carnation latent virus isolate KL, complete genome blastn 172 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
20961207 20961207 PRJNA572587_P_NODE_37577_length_179_cov_6.938462_g37249_i0 PRJNA572587 37577 179 6.938462 12.41984698 Carlavirus latensdianthi 3427766 Viruses Viruses 52.8 0.015   NTclustered gi|1995060321|gb|MN450069.1| 12164 g37249 i0 100 0.156424581005587 28 0 16 0 152 179 42 15 Carnation latent virus isolate KL, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
22235709 22235709 PRJNA572587_P_NODE_12738_length_326_cov_17.534296_g12410_i0 PRJNA572587 12738 326 17.534296 57.16180496 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.009   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g12410 i0 100 0.174846625766871 29 0 9 0 1 29 6 34 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
22236043 22236043 PRJNA572587_P_NODE_33038_length_192_cov_20.818182_g32710_i0 PRJNA572587 33038 192 20.818182 39.97090944 Carlavirus latensdianthi 3427766 Viruses Viruses 58.4 3.55e-4   NTclustered gi|1995060321|gb|MN450069.1| 12164 g32710 i0 94.595 0.817708333333333 37 2 19 0 156 192 49 13 Carnation latent virus isolate KL, complete genome blastn 157 58.4 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
22236107 22236107 PRJNA572587_P_NODE_38218_length_177_cov_13.804688_g37890_i0 PRJNA572587 38218 177 13.804688 24.43429776 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.004   NTclustered gi|1995060321|gb|MN450069.1| 12164 g37890 i0 96.875 1.07909604519774 32 1 18 0 146 177 44 13 Carnation latent virus isolate KL, complete genome blastn 191 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;