RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA572587", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA572587 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12038124 12038124 PRJNA572587_P_NODE_3790_length_667_cov_45.262136_g3502_i0 PRJNA572587 3790 667 45.262136 301.89844712 Diadema antillarum 105358 Echinodermata other_Eukaryota 187 2.8299999999999996e-57   NR XP_071509664.1 105358 g3502 i0 79 2.38830584707646 105 22 47.2 0 544 230 1 105 XP_071509664.1 peptidyl-prolyl cis-trans isomerase FKBP1A-like [Diadema antillarum] diamond 1593 187 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
27711769 27711769 PRJNA572587_P_NODE_1564_length_1013_cov_22.038382_g1413_i0 PRJNA572587 1564 1013 22.038382 223.24880966 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 69.3 4.31e-9   NR KAJ8032173.1 206669 g1413 i0 46.4 0.538993089832182 56 30 16.6 0 631 464 28 83 KAJ8032173.1 Natterin-4 [Holothuria leucospilota] diamond 546 69.3 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;