RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA572587", tax_kingdom = "Metazoa" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 5 ✖

tax_kingdom 1

  • Metazoa · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA572587 · 5 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3109632 3109632 PRJNA572587_P_NODE_16763_length_279_cov_13.400000_g16435_i0 PRJNA572587 16763 279 13.4 37.386 Platynereis dumerilii 6359 Annelida Annelida 56.5 0.002   NTclustered gi|146189520|emb|AM697674.1| 6359 g16435 i0 100 2.0179211469534 30 0 11 0 1 30 173 202 Platynereis dumerilii mRNA for hypothetical protein (ORF1), isolate 2 blastn 563 56.5 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Phyllodocida Nereididae Platynereis Platynereis dumerilii
8211958 8211958 PRJNA572587_P_NODE_28347_length_209_cov_12.662500_g28019_i0 PRJNA572587 28347 209 12.6625 26.464625 Platynereis dumerilii 6359 Annelida Annelida 56.5 0.001   NTclustered gi|146189520|emb|AM697674.1| 6359 g28019 i0 100 2.69377990430622 30 0 14 0 1 30 173 202 Platynereis dumerilii mRNA for hypothetical protein (ORF1), isolate 2 blastn 563 56.5 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Phyllodocida Nereididae Platynereis Platynereis dumerilii
8788792 8788792 PRJNA572587_P_NODE_15087_length_296_cov_40.364372_g14759_i0 PRJNA572587 15087 296 40.364372 119.47854112 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 56.5 0.002   NTclustered gi|146189520|emb|AM697674.1| 6359 g14759 i0 100 1.90878378378378 30 0 10 0 5 34 173 202 Platynereis dumerilii mRNA for hypothetical protein (ORF1), isolate 2 blastn 565 56.5 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Phyllodocida Nereididae Platynereis Platynereis dumerilii
8788871 8788871 PRJNA572587_P_NODE_30447_length_201_cov_6.473684_g30119_i0 PRJNA572587 30447 201 6.473684 13.01210484 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 56.5 0.001   NTclustered gi|146189520|emb|AM697674.1| 6359 g30119 i0 100 3.13930348258706 30 0 15 0 166 195 202 173 Platynereis dumerilii mRNA for hypothetical protein (ORF1), isolate 2 blastn 631 56.5 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Phyllodocida Nereididae Platynereis Platynereis dumerilii
24088016 24088016 PRJNA572587_P_NODE_7519_length_444_cov_23.301266_g7194_i0 PRJNA572587 7519 444 23.301266 103.45762104 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 56.5 0.003   NTclustered gi|146189520|emb|AM697674.1| 6359 g7194 i0 100 1.42117117117117 30 0 7 0 7 36 173 202 Platynereis dumerilii mRNA for hypothetical protein (ORF1), isolate 2 blastn 631 56.5 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Phyllodocida Nereididae Platynereis Platynereis dumerilii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;