RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA572587", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA572587 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14587989 14587989 PRJNA572587_P_NODE_7372_length_449_cov_370.145000_g7047_i0 PRJNA572587 7372 449 370.145 1661.95105 Zoophthora radicans 42210 Fungi Fungi 134 1.51e-26   NTclustered gi|2489628978|gb|OQ831924.1| 42210 g7047 i0 90.196 27.7973273942094 102 10 23 0 292 393 1653 1552 Zoophthora radicans strain ATCC 208865 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12481 134 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Zoophthora Zoophthora radicans
27029839 27029839 PRJNA572587_P_NODE_402_length_1598_cov_7.494513_g371_i0 PRJNA572587 402 1598 7.494513 119.76231774 Basidiobolus 4859 Fungi Fungi 168 1.15e-43   NR KAK9766556.1 34480 g371 i0 34.1 1.2540675844806 337 172 61.2 8 437 1414 21 318 KAK9766556.1 hypothetical protein K7432_004280 [Basidiobolus ranarum] diamond 2004 169 0.994082840236686 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus ranarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;